生态学报
生態學報
생태학보
ACTA ECOLOGICA SINICA
2009年
7期
3585-3592
,共8页
鼬科%线粒体DNA%控制区%系统发育
鼬科%線粒體DNA%控製區%繫統髮育
유과%선립체DNA%공제구%계통발육
Mustelidae%mitochondrial DNA%control region%phylogeny
利用PCR技术获得紫貂(Martes zibellina)和黄喉貂(Martes flavigula)线粒体DNA控制区全序列,并结合从GenBank中下载的9种鼬科动物相应序列,用ClustalX排序后对控制区结构进行分析,识别出延长终止序列区、中央区和保守序列区3个区域,指出了一个终止相关序列ETAS1及8个保守序列(CSB-F、E、D、C、B、1、2和3),并给出了序列通式,在CSB1和CSB2之间发现不同形式的短重复序列.此外,以狼为外类群,应用邻接法构建鼬科线粒体控制区全序列的系统进化树,结果表明:臭鼬亚科最先从鼬科中分化出来,随后剩余类群分为两大支系,即貂属种类与貂熊聚为一支,并与獾亚科的狗獾形成姐妹群;另一支为水獭亚科的物种与鼬属的林鼬形成姐妹群,再与虎鼬聚在一起,狗獾与貂属的紫貂亲缘关系最近,水獭亚科与鼬属亲缘关系最近.
利用PCR技術穫得紫貂(Martes zibellina)和黃喉貂(Martes flavigula)線粒體DNA控製區全序列,併結閤從GenBank中下載的9種鼬科動物相應序列,用ClustalX排序後對控製區結構進行分析,識彆齣延長終止序列區、中央區和保守序列區3箇區域,指齣瞭一箇終止相關序列ETAS1及8箇保守序列(CSB-F、E、D、C、B、1、2和3),併給齣瞭序列通式,在CSB1和CSB2之間髮現不同形式的短重複序列.此外,以狼為外類群,應用鄰接法構建鼬科線粒體控製區全序列的繫統進化樹,結果錶明:臭鼬亞科最先從鼬科中分化齣來,隨後剩餘類群分為兩大支繫,即貂屬種類與貂熊聚為一支,併與獾亞科的狗獾形成姐妹群;另一支為水獺亞科的物種與鼬屬的林鼬形成姐妹群,再與虎鼬聚在一起,狗獾與貂屬的紫貂親緣關繫最近,水獺亞科與鼬屬親緣關繫最近.
이용PCR기술획득자초(Martes zibellina)화황후초(Martes flavigula)선립체DNA공제구전서렬,병결합종GenBank중하재적9충유과동물상응서렬,용ClustalX배서후대공제구결구진행분석,식별출연장종지서렬구、중앙구화보수서렬구3개구역,지출료일개종지상관서렬ETAS1급8개보수서렬(CSB-F、E、D、C、B、1、2화3),병급출료서렬통식,재CSB1화CSB2지간발현불동형식적단중복서렬.차외,이랑위외류군,응용린접법구건유과선립체공제구전서렬적계통진화수,결과표명:취유아과최선종유과중분화출래,수후잉여류군분위량대지계,즉초속충류여초웅취위일지,병여환아과적구환형성저매군;령일지위수달아과적물충여유속적림유형성저매군,재여호유취재일기,구환여초속적자초친연관계최근,수달아과여유속친연관계최근.
Complete sequences of the mitochondrial DNA control region from Sable and Yellow-throated marten were amplified by Polymerase Chain Reaction (PCR), and were aligned by ClustalX with nine other species of Mustelidae from GenBank. According to the alignment, three domains, the extended termination associated sequence domain (ETAS), the central domain (CD) and the conserved sequence block domain (CSB), were identified in the mtDNA control region of Mustelidae. A extended termination associated sequence(ETAS1) and eight conserved sequence(CSB-F, E, D, C, B, 1, 2, 3) were identified, and mode of sequence was provided. Different kinds of short repetitive sequences were found between CSB1 and CSB2. Moreover, the phylogenetic evolution relationship of Mustelidae was analyzed using the neighbor-joining(NJ) method with the Wolf as the outgroup,. The results showed that Mephitinae was divided from Mustelidae firstly, and then the others were divided into two branches. The species of Martes and Wolverine were contained in one branch which was formed a sister group with Eurasian badger of Melinae;The species of Lutrinae and Polecat of Mustela formed a sister group, and Marbled polecat was sister to the clade of Lutrinae species and Polecat. They formed another branch. Eurasian badger has the closest relationship with the Sable of Martes, and Lutrinae has the closest relationship with Mustela.