基因组学与应用生物学
基因組學與應用生物學
기인조학여응용생물학
Genomics and Applied Biology
2011年
1期
21-26
,共6页
范丙友%高水平%侯小改%胥华伟%史国安%孔祥生
範丙友%高水平%侯小改%胥華偉%史國安%孔祥生
범병우%고수평%후소개%서화위%사국안%공상생
拟南芥%Col生态型%APETALA3启动子%植物表达载体构建
擬南芥%Col生態型%APETALA3啟動子%植物錶達載體構建
의남개%Col생태형%APETALA3계동자%식물표체재체구건
Arabidopsis thaliana%Ecotype Col%Promoter of APETALA3%Construction of plant expression vector
隶属于MADS-Box基因家族的拟南芥花器官B类特征基因APETALA3(AP3)在花瓣和雄蕊中特异性地表达;AP3基因编码转录因子,与A类和C类特征基因协同作用控制双子叶植物花瓣和雄蕊的发育。研究表明AP3基因启动子为花特异表达启动子。因此,AP3基因启动子的克隆及功能鉴定对于园林植物与花相关的商业性状的定向改良具有重要作用。本文根据GenBank数据库报道的Ler生态型拟南芥(Arabidopsis thaliana)AP3基因启动子序列(U30729)设计了一对特异性扩增引物,基于PCR技术,用高保真的KOD-plusDNA聚合酶扩增了长度为1767bp的Col生态型拟南芥AP3基因启动子,并命名为pAtAP3,其Gen-Bank登录号为FJ619533。Bl2seq在线分析表明pAtAP3与U30729序列的相似性达98%,与Col生态型拟南芥BAC克隆T12E18(AL132971)9264~11030之间的碱基序列相似性达100%,且该段序列的下游基因编码AP3蛋白(CAB81799),说明克隆序列为Col生态型拟南芥AP3基因的启动子。PLACE在线分析表明pAtAP3具有基本的启动子元件TATA-box和CAAT-box,还包含大量与花特异表达相关的顺式元件CArG1、CArG2、CArG3和anther-box等。本试验进一步构建了植物表达载体pAtAP3::GUS,为该启动子的功能鉴定奠定了基础。
隸屬于MADS-Box基因傢族的擬南芥花器官B類特徵基因APETALA3(AP3)在花瓣和雄蕊中特異性地錶達;AP3基因編碼轉錄因子,與A類和C類特徵基因協同作用控製雙子葉植物花瓣和雄蕊的髮育。研究錶明AP3基因啟動子為花特異錶達啟動子。因此,AP3基因啟動子的剋隆及功能鑒定對于園林植物與花相關的商業性狀的定嚮改良具有重要作用。本文根據GenBank數據庫報道的Ler生態型擬南芥(Arabidopsis thaliana)AP3基因啟動子序列(U30729)設計瞭一對特異性擴增引物,基于PCR技術,用高保真的KOD-plusDNA聚閤酶擴增瞭長度為1767bp的Col生態型擬南芥AP3基因啟動子,併命名為pAtAP3,其Gen-Bank登錄號為FJ619533。Bl2seq在線分析錶明pAtAP3與U30729序列的相似性達98%,與Col生態型擬南芥BAC剋隆T12E18(AL132971)9264~11030之間的堿基序列相似性達100%,且該段序列的下遊基因編碼AP3蛋白(CAB81799),說明剋隆序列為Col生態型擬南芥AP3基因的啟動子。PLACE在線分析錶明pAtAP3具有基本的啟動子元件TATA-box和CAAT-box,還包含大量與花特異錶達相關的順式元件CArG1、CArG2、CArG3和anther-box等。本試驗進一步構建瞭植物錶達載體pAtAP3::GUS,為該啟動子的功能鑒定奠定瞭基礎。
대속우MADS-Box기인가족적의남개화기관B류특정기인APETALA3(AP3)재화판화웅예중특이성지표체;AP3기인편마전록인자,여A류화C류특정기인협동작용공제쌍자협식물화판화웅예적발육。연구표명AP3기인계동자위화특이표체계동자。인차,AP3기인계동자적극륭급공능감정대우완림식물여화상관적상업성상적정향개량구유중요작용。본문근거GenBank수거고보도적Ler생태형의남개(Arabidopsis thaliana)AP3기인계동자서렬(U30729)설계료일대특이성확증인물,기우PCR기술,용고보진적KOD-plusDNA취합매확증료장도위1767bp적Col생태형의남개AP3기인계동자,병명명위pAtAP3,기Gen-Bank등록호위FJ619533。Bl2seq재선분석표명pAtAP3여U30729서렬적상사성체98%,여Col생태형의남개BAC극륭T12E18(AL132971)9264~11030지간적감기서렬상사성체100%,차해단서렬적하유기인편마AP3단백(CAB81799),설명극륭서렬위Col생태형의남개AP3기인적계동자。PLACE재선분석표명pAtAP3구유기본적계동자원건TATA-box화CAAT-box,환포함대량여화특이표체상관적순식원건CArG1、CArG2、CArG3화anther-box등。본시험진일보구건료식물표체재체pAtAP3::GUS,위해계동자적공능감정전정료기출。
Belonging to MADS-Box gene family, Arabidopsis floral organ identity B gene APETALA3 (AP3) is expressed in petals and stamens specifically. AP3 gene which encodes a transcription factor controls the development of petals and stamens of dicotyledons, in combination with the class A and C genes, respectively. It indicated that the promoter of AP3 gene was a flower-specific expression promoter. Therefore, cloning and characterization of AP3 gene promoter from Arabidopsis thaliana will have significant effects on the oriented improvement of the commercial traits related to the flowers of ornamental plants. Here, a pair of specific PCR primers was designed according to promoter sequence of AP3 gene of Arabidopsis thaliana(ecotype Ler) reported in GenBank (U30729). A 1 767 bp long sequence of AP3 gene promoter was isolated from Arabidopsis thaliana (ecotype Col) by using PCR technique with high-fidelity DNA polymerase KOD-plus. The GenBank accession of pAtAP3 is FJ619533. Online Bl2seq analysis indicated that the sequence similarity between pAtAP3 and U30729 was 98%. It also showed that the sequence similarity between pAtAP3 and the base from 9 264 to 11 030 of BAC clone T12E18 (AL132971) of Arabidopsis thaliana (ecotype Col) was up to 100%, and its downstream sequence encoded AP3 protein (CAB81799), which approved that the cloned sequence was promoter of AP3 gene of Arabidopsis thaliana (ecotype Col). Online PLACE analysis revealed that pAtAP3 contained basic cis-elements of promoter such as TATA-box and CAAT-box. It also comprised of several cis-elements like CArG1, CArG2, CArG3 and anther-box, which were all related to flower-specific expression. Moreover, plant expression vector of pAtAP3::GUS was successfully constructed, laying the foundation for functional characterization of the AP3 promoter of Arabidopsis thaliana (ecotype Col).