西北植物学报
西北植物學報
서북식물학보
ACTA BOTANICA BOREALI-OCCIDENTALIA SINICA
2010年
3期
481-486
,共6页
孙正海%萧凤回%曾亚文%杨树明%杜娟%普晓英%汪禄祥
孫正海%蕭鳳迴%曾亞文%楊樹明%杜娟%普曉英%汪祿祥
손정해%소봉회%증아문%양수명%두연%보효영%왕록상
近等基因系%糙米%钙含量%BSA%混合线性模型%QTL
近等基因繫%糙米%鈣含量%BSA%混閤線性模型%QTL
근등기인계%조미%개함량%BSA%혼합선성모형%QTL
near-isogenic lines%brown rice%calcium content%bulked segregant analysis%mixed linear model%quantitative traits loci
以'十和田'为轮回亲本,'丽粳2号'为供体,培育出糙米钙含量近等基因系下的重组近交系261个BC_5F_6株系,采用BSA法从遍布水稻12条染色体上的600对SSR引物中筛选到1个与糙米钙含量有关联的SSR标记RM5536.进一步据其在水稻染色体上的位置,结合PCR找到了与糙米钙含量有关的3个SSR标记(RM5794、RM5362和RM12178).用MAPMAKER/EXP3.0软件做出了这4个标记的连锁群,最后采用混合线性模型找到了糙米钙含量QTL位点.QTL分析结果显示:该位点位于1号染色体引物RM12178和RM5362之间,贡献率为9.62%,为新发现的糙米钙含量QTL位点,暂命名为qBRCA-1.并发现与糙米锶含量有关的QTL位点,其位于标记RM5362和RM5794之间,贡献率为3.93%.同时本试验首次从分子水平上验证了偏相关比简单相关更准确解释元素间的相关性.
以'十和田'為輪迴親本,'麗粳2號'為供體,培育齣糙米鈣含量近等基因繫下的重組近交繫261箇BC_5F_6株繫,採用BSA法從遍佈水稻12條染色體上的600對SSR引物中篩選到1箇與糙米鈣含量有關聯的SSR標記RM5536.進一步據其在水稻染色體上的位置,結閤PCR找到瞭與糙米鈣含量有關的3箇SSR標記(RM5794、RM5362和RM12178).用MAPMAKER/EXP3.0軟件做齣瞭這4箇標記的連鎖群,最後採用混閤線性模型找到瞭糙米鈣含量QTL位點.QTL分析結果顯示:該位點位于1號染色體引物RM12178和RM5362之間,貢獻率為9.62%,為新髮現的糙米鈣含量QTL位點,暫命名為qBRCA-1.併髮現與糙米鍶含量有關的QTL位點,其位于標記RM5362和RM5794之間,貢獻率為3.93%.同時本試驗首次從分子水平上驗證瞭偏相關比簡單相關更準確解釋元素間的相關性.
이'십화전'위륜회친본,'려갱2호'위공체,배육출조미개함량근등기인계하적중조근교계261개BC_5F_6주계,채용BSA법종편포수도12조염색체상적600대SSR인물중사선도1개여조미개함량유관련적SSR표기RM5536.진일보거기재수도염색체상적위치,결합PCR조도료여조미개함량유관적3개SSR표기(RM5794、RM5362화RM12178).용MAPMAKER/EXP3.0연건주출료저4개표기적련쇄군,최후채용혼합선성모형조도료조미개함량QTL위점.QTL분석결과현시:해위점위우1호염색체인물RM12178화RM5362지간,공헌솔위9.62%,위신발현적조미개함량QTL위점,잠명명위qBRCA-1.병발현여조미송함량유관적QTL위점,기위우표기RM5362화RM5794지간,공헌솔위3.93%.동시본시험수차종분자수평상험증료편상관비간단상관경준학해석원소간적상관성.
With the near-isogenic line-recombinant inbred line (NIL-RIL)(261lines,BC_5F_6) population of calcium content in brown rice (which were bred with Towada as recurrent parent and Lijing 2 as donor parent) as experiment material,a SSR marker RM5536,which correlated with calcium content in brown rice,was found from 600 primers distributed in 12 chromosomes of rice by BSA.According to its position in rice chromosome and PCR amplification results,we also found three SSR makers (RM5794,RM5362 and RM12178) which correlated with calcium content in brown rice.We use software MAPMAKER/EXP3.0 to work out a linkage group of the four markers.With the mixed linear model mapping method,we finally found the locus of QTL related to calcium content in brown rice.QTL analysis showed that this locus was between RM12178 and RM5362 of the first chromosome and its percentage of variance explained was 9.62%.It was a newly-found QTL related to calcium content in brown rice and was named as qBRCA-1.Meanwhile QTL loci related to Strontium content in brown rice were also found,i.e the QTL located between RM5362 and RM5794,it's percentage of variance explained was 3.93%.Correlations beween elements that were explained by partial correlation more exact than Bivariat correlation were firstly validated at molecular level by this experiment.