基因组学与应用生物学
基因組學與應用生物學
기인조학여응용생물학
Genomics and Applied Biology
2011年
1期
40-46
,共7页
周一旸%洑香香%尚旭岚%杨万霞%方升佐
週一旸%洑香香%尚旭嵐%楊萬霞%方升佐
주일양%보향향%상욱람%양만하%방승좌
青钱柳%SRAP%优化%遗传多样性%聚类
青錢柳%SRAP%優化%遺傳多樣性%聚類
청전류%SRAP%우화%유전다양성%취류
Cylocarya paliurus%SRAP%Optimization%Genetic polymorphism%Cluster
为了利用分子标记方法评价青钱柳种质资源的遗传多样性,本文对青钱柳DNA的提取、SRAP扩增体系重要参数进行了优化,运用优化体系筛选多态性引物,并用1对引物对青钱柳9个种源进行了遗传多样性初步分析。研究结果建立了适于青钱柳SRAP的扩增体系;从110对SRAP引物中筛选出了13对多态性引物,运用1对引物组合Me7+Em2扩增获得21个多态性位点,多态率达100%。遗传多样性分析表明有效等位基因数(Ne)为1.3429,平均Shannon's信息指数(I)为0.3687,Nei's基因多样性指数(H)为0.2267,种源的遗传分化指数Gst为0.1983;聚类分析结果表明9个种源在遗传距离0.100处聚为3类,聚类结果和地理距离之间呈现较高的相关性。本文的研究结果表明所建立的青钱柳种质资源库具有广泛的遗传多样性,为进一步的开发利用提供了条件。
為瞭利用分子標記方法評價青錢柳種質資源的遺傳多樣性,本文對青錢柳DNA的提取、SRAP擴增體繫重要參數進行瞭優化,運用優化體繫篩選多態性引物,併用1對引物對青錢柳9箇種源進行瞭遺傳多樣性初步分析。研究結果建立瞭適于青錢柳SRAP的擴增體繫;從110對SRAP引物中篩選齣瞭13對多態性引物,運用1對引物組閤Me7+Em2擴增穫得21箇多態性位點,多態率達100%。遺傳多樣性分析錶明有效等位基因數(Ne)為1.3429,平均Shannon's信息指數(I)為0.3687,Nei's基因多樣性指數(H)為0.2267,種源的遺傳分化指數Gst為0.1983;聚類分析結果錶明9箇種源在遺傳距離0.100處聚為3類,聚類結果和地理距離之間呈現較高的相關性。本文的研究結果錶明所建立的青錢柳種質資源庫具有廣汎的遺傳多樣性,為進一步的開髮利用提供瞭條件。
위료이용분자표기방법평개청전류충질자원적유전다양성,본문대청전류DNA적제취、SRAP확증체계중요삼수진행료우화,운용우화체계사선다태성인물,병용1대인물대청전류9개충원진행료유전다양성초보분석。연구결과건립료괄우청전류SRAP적확증체계;종110대SRAP인물중사선출료13대다태성인물,운용1대인물조합Me7+Em2확증획득21개다태성위점,다태솔체100%。유전다양성분석표명유효등위기인수(Ne)위1.3429,평균Shannon's신식지수(I)위0.3687,Nei's기인다양성지수(H)위0.2267,충원적유전분화지수Gst위0.1983;취류분석결과표명9개충원재유전거리0.100처취위3류,취류결과화지리거리지간정현교고적상관성。본문적연구결과표명소건립적청전류충질자원고구유엄범적유전다양성,위진일보적개발이용제공료조건。
In order to assess the genetic diversity of germplasm for Cyclocarya paliurus by molecular markers, DNA extraction method and key parameters of SRAP reaction system were optimized; polymorphic primers were screened with the optimal system, and preliminary analysis of genetic diversity of 9 provenances by using a pair of primers was operated in this paper. The results showed that a SRAP reaction system for Cyclocarya paliurus was established through optimal design. 13 pairs of polymorphic primers were screened from 110 pairs of SRAP markers and 21 bands were amplified using primer pair Me7+Em2 with the polymorphic rate of 100%. Moreover, genetic diversity analysis showed that the mean Ne value of 9 provenances was 1.342 9; the mean I value, the mean H value and provenance Gst was 0.368 7, 0.226 7 and 0.198 3, respectively. The UPGMA clustering analysis displayed that 9 provenances could be divided into 3 groups at the genetic distance of 0.100, which indicated a higher correlation between the genetic distance and geographic distribution among provenances. The results of this reseach showed that germplasm of Cyclocarya paliurus we collected had widely genetic diversity, and would provide a better basis of exploitation.