湖泊科学
湖泊科學
호박과학
JOURNAL OF LAKE SCIENCES
2006年
3期
285-292
,共8页
张文静%余育和%沈韫芬%颜庆云
張文靜%餘育和%瀋韞芬%顏慶雲
장문정%여육화%침운분%안경운
眼虫%微卫星DNA%原生动物%相似性关系%株的区分
眼蟲%微衛星DNA%原生動物%相似性關繫%株的區分
안충%미위성DNA%원생동물%상사성관계%주적구분
Euglena%microsatellite DNA%protozoa%similarity relationships%strains separation
尽管以前对眼虫进行过大量的形态发育研究和基于核糖体RNA基因的系统发育分析,但对于株系之间的关系仍然知之甚少.因其形态特征有限并且易变,很难鉴定眼虫的相似种和同种内不同的株.作者利用微卫星DNA指纹图谱,在七株眼虫中扩增了七个微卫星DNA位点,成功扩增的六个微卫星引物都得到了四到八个条带.从微卫星DNA指纹图谱计算得到的相似性系数范围从0.000到0,957.根据相似性系数得到的树状结构,七株眼虫在距离为0.9346处分为三支:E.mutabilis,E.intermedia和E.gracilis.其中,五株E.gracilis分为两组:来自日本的和美国的.不同地区的株得到不同的基因型,并初步分析了它们之间的关系.研究表明七株眼虫根据微卫星DNA指纹图谱被明显区分开.微卫星DNA指纹图谱具有很高的分辨率,是鉴定和区分原生动物相似种和同种内不同株的一种有用的新方法.
儘管以前對眼蟲進行過大量的形態髮育研究和基于覈糖體RNA基因的繫統髮育分析,但對于株繫之間的關繫仍然知之甚少.因其形態特徵有限併且易變,很難鑒定眼蟲的相似種和同種內不同的株.作者利用微衛星DNA指紋圖譜,在七株眼蟲中擴增瞭七箇微衛星DNA位點,成功擴增的六箇微衛星引物都得到瞭四到八箇條帶.從微衛星DNA指紋圖譜計算得到的相似性繫數範圍從0.000到0,957.根據相似性繫數得到的樹狀結構,七株眼蟲在距離為0.9346處分為三支:E.mutabilis,E.intermedia和E.gracilis.其中,五株E.gracilis分為兩組:來自日本的和美國的.不同地區的株得到不同的基因型,併初步分析瞭它們之間的關繫.研究錶明七株眼蟲根據微衛星DNA指紋圖譜被明顯區分開.微衛星DNA指紋圖譜具有很高的分辨率,是鑒定和區分原生動物相似種和同種內不同株的一種有用的新方法.
진관이전대안충진행과대량적형태발육연구화기우핵당체RNA기인적계통발육분석,단대우주계지간적관계잉연지지심소.인기형태특정유한병차역변,흔난감정안충적상사충화동충내불동적주.작자이용미위성DNA지문도보,재칠주안충중확증료칠개미위성DNA위점,성공확증적륙개미위성인물도득도료사도팔개조대.종미위성DNA지문도보계산득도적상사성계수범위종0.000도0,957.근거상사성계수득도적수상결구,칠주안충재거리위0.9346처분위삼지:E.mutabilis,E.intermedia화E.gracilis.기중,오주E.gracilis분위량조:래자일본적화미국적.불동지구적주득도불동적기인형,병초보분석료타문지간적관계.연구표명칠주안충근거미위성DNA지문도보피명현구분개.미위성DNA지문도보구유흔고적분변솔,시감정화구분원생동물상사충화동충내불동주적일충유용적신방법.
The genetic relationships among Euglena strains remain poorly understood, despite a rich history of morphological examination and an extensive phylogenetic analysis of the ribosomal RNA genes. It is difficult to identify related species of the genus Euglena and to separate different strains of the same species because the morphological characters are variable and limited. We address this question using microsatellite DNA fingerprinting. Seven microsatellite loci were amplified from 7 Euglena strains. A total of 4 - 8 bands were successfully amplified for each of 6microsatellite primer pairs. Microsatellite DNA fingerprinting and similarity values ranging from 0.000 to 0.957 a-mong the seven strains were obtained, which were used to construct a similarity tree among them. According to the tree, at the linkage distance of 0.9346 seven strains were separated into three clusters: E. mutabilis, E. intermedia and E. gracilis consisting of Japanese and USA groups. Further, in the cluster E. gracilis, different genotypes were recognized for the strains from different geographical origins. The relationships among species and strains were analyzed preliminarily. We demonstrates that the seven strains of Euglena can be clearly separated by their microsatellite DNA fingerprinting patterns. The microsatellite DNA fingerprinting has a high resolution and is a new useful method to identify and separate similar species and intraspecific strains in free-living protozoa.