分子细胞生物学报
分子細胞生物學報
분자세포생물학보
JOURNAL OF MOLECULAR CELL BIOLOGY
2006年
6期
502-508
,共7页
陈士超%杨红%郑勇平%陈跃磊%邱英雄
陳士超%楊紅%鄭勇平%陳躍磊%邱英雄
진사초%양홍%정용평%진약뢰%구영웅
常山胡柚%RAPD%ISSR%基因型鉴定
常山鬍柚%RAPD%ISSR%基因型鑒定
상산호유%RAPD%ISSR%기인형감정
Citrus changshan-huyou. RAPD. ISSR. genotype identification
本研究利用RAPD和ISSR分子标记对常山胡柚的优良基因型进行鉴定,并探讨常山胡柚的起源.从100个RAPD引物中筛选出12个多态性引物用于正式扩增,共得到117条DNA带,其中多态性DNA带64条,占扩增片段的54.7%;从105个ISSR引物中筛选出11个多态性引物用于正式扩增,共得到94条DNA带,其中多态性DNA带58条,占扩增片段的61.7%.RAPD和ISSR分析揭示了常山胡柚及其近缘种的一些特异性条带,ISSR共产生了15条特异条带,RAPD共产生12特异性条带.实验数据用AMOVA软件计算遗传距离,用NTSYS-pc软件构建UPGMA聚类树状图.结果显示,所有的基因型及不同种之间均能够彼此区分,分析得到的指纹图谱对常山胡柚种和基因型的鉴定具有潜在的应用价值,可用于优良基因型的鉴定.聚类分析结果显示常山胡柚和甜柚聚为一枝,确定了甜柚是杂交亲本之一,但是常山胡柚和柚的遗传距离较远,说明常山胡柚可能是甜橙、柚和柑桔属其他种的多重自然杂交的结果.
本研究利用RAPD和ISSR分子標記對常山鬍柚的優良基因型進行鑒定,併探討常山鬍柚的起源.從100箇RAPD引物中篩選齣12箇多態性引物用于正式擴增,共得到117條DNA帶,其中多態性DNA帶64條,佔擴增片段的54.7%;從105箇ISSR引物中篩選齣11箇多態性引物用于正式擴增,共得到94條DNA帶,其中多態性DNA帶58條,佔擴增片段的61.7%.RAPD和ISSR分析揭示瞭常山鬍柚及其近緣種的一些特異性條帶,ISSR共產生瞭15條特異條帶,RAPD共產生12特異性條帶.實驗數據用AMOVA軟件計算遺傳距離,用NTSYS-pc軟件構建UPGMA聚類樹狀圖.結果顯示,所有的基因型及不同種之間均能夠彼此區分,分析得到的指紋圖譜對常山鬍柚種和基因型的鑒定具有潛在的應用價值,可用于優良基因型的鑒定.聚類分析結果顯示常山鬍柚和甜柚聚為一枝,確定瞭甜柚是雜交親本之一,但是常山鬍柚和柚的遺傳距離較遠,說明常山鬍柚可能是甜橙、柚和柑桔屬其他種的多重自然雜交的結果.
본연구이용RAPD화ISSR분자표기대상산호유적우량기인형진행감정,병탐토상산호유적기원.종100개RAPD인물중사선출12개다태성인물용우정식확증,공득도117조DNA대,기중다태성DNA대64조,점확증편단적54.7%;종105개ISSR인물중사선출11개다태성인물용우정식확증,공득도94조DNA대,기중다태성DNA대58조,점확증편단적61.7%.RAPD화ISSR분석게시료상산호유급기근연충적일사특이성조대,ISSR공산생료15조특이조대,RAPD공산생12특이성조대.실험수거용AMOVA연건계산유전거리,용NTSYS-pc연건구건UPGMA취류수상도.결과현시,소유적기인형급불동충지간균능구피차구분,분석득도적지문도보대상산호유충화기인형적감정구유잠재적응용개치,가용우우량기인형적감정.취류분석결과현시상산호유화첨유취위일지,학정료첨유시잡교친본지일,단시상산호유화유적유전거리교원,설명상산호유가능시첨등、유화감길속기타충적다중자연잡교적결과.
Random amplified polymorphic DNA (RAPD) and inter-simple sequence repeat (ISSR) analyses were used in elite genotypes identification of Citrus changshan-huyou and analysis of its origin. 12 out of 100 RAPD primers and 11 out of 105 ISSR primers could generate reproducible polymorphic fragments. The RAPD-PCR and ISSR-PCR assays revealed that 64 bands out of 117 (the percentage of polymorphic bands,PPB=54.7%) and 58 bands out of 94 (PPB=61.7%)were polymorphic,respectively. ISSR and RAPD produced 15 and 12 genotype-specific and species-specific molecular markers. Analysis of molecular variance (AMOVA) was used to calculate the similarity values according to these polymorphic bands,and a dendrogram was constructed using NTSYS-pc software. Each genotype and species in this study could be distinguished from others,suggesting that DNA profiles based on ISSR and RAPD markers have produced potential diagnostic fingerprints for various species,and also for genotypes. The molecular phylogenetic tree shows that C. changshan-huyou and C. sinensis formed a subcluster,so we can conclude that C. sinensis is an assured parent of C. changshan-huyou. However the largest genetic distance was found between C. grandis and C. changshan-huyou,it might be explained that C. changshan-huyou is the origin of multitude of natural hybrids from C. sinensis ,C. grandis and other species of Citrus.