生物信息学
生物信息學
생물신식학
BIOINFORMATICS
2004年
3期
6-11
,共6页
张艳萍%靳飞%柴小青%卫功宏%印莉萍
張豔萍%靳飛%柴小青%衛功宏%印莉萍
장염평%근비%시소청%위공굉%인리평
水稻%铁营养%双向电泳
水稻%鐵營養%雙嚮電泳
수도%철영양%쌍향전영
Rice / Iron nutrition/ Two-dimensional gel electrophoresis(2DE)
水稻幼苗经缺铁胁迫诱导分别处理1、3、5天后,用酚法和TCA/丙酮法提取叶片中的可溶性蛋白进行双向电泳分析,从而研究在缺铁条件下叶片中蛋白表达的动态变化规律.结果显示:1.不同pH IPG胶条分离蛋白的效果不同.用pH3-10的IPG胶条进行双向电泳,经考马斯亮蓝染色后,可在胶面上检测到大约450个蛋白点,其中约有89%的蛋白是酸性蛋白.如果用pH4-7的IPG胶条进行双向电泳,则可检测到大约600个蛋白点,其中有29个蛋白是上调表达,1个蛋白是下调表达,5个蛋白是诱导特异表达.2.不同方法提取的可溶性蛋白质量不同.TCA法简单易操作,似乎对于碱性蛋白的抽提效果更好,在2-DE图像上,减性端显示的蛋白点多;但此方法所得蛋白的再溶性差.酚法提取的蛋白再溶性好,所抽提的蛋白量较大,纯度较高.
水稻幼苗經缺鐵脅迫誘導分彆處理1、3、5天後,用酚法和TCA/丙酮法提取葉片中的可溶性蛋白進行雙嚮電泳分析,從而研究在缺鐵條件下葉片中蛋白錶達的動態變化規律.結果顯示:1.不同pH IPG膠條分離蛋白的效果不同.用pH3-10的IPG膠條進行雙嚮電泳,經攷馬斯亮藍染色後,可在膠麵上檢測到大約450箇蛋白點,其中約有89%的蛋白是痠性蛋白.如果用pH4-7的IPG膠條進行雙嚮電泳,則可檢測到大約600箇蛋白點,其中有29箇蛋白是上調錶達,1箇蛋白是下調錶達,5箇蛋白是誘導特異錶達.2.不同方法提取的可溶性蛋白質量不同.TCA法簡單易操作,似乎對于堿性蛋白的抽提效果更好,在2-DE圖像上,減性耑顯示的蛋白點多;但此方法所得蛋白的再溶性差.酚法提取的蛋白再溶性好,所抽提的蛋白量較大,純度較高.
수도유묘경결철협박유도분별처리1、3、5천후,용분법화TCA/병동법제취협편중적가용성단백진행쌍향전영분석,종이연구재결철조건하협편중단백표체적동태변화규률.결과현시:1.불동pH IPG효조분리단백적효과불동.용pH3-10적IPG효조진행쌍향전영,경고마사량람염색후,가재효면상검측도대약450개단백점,기중약유89%적단백시산성단백.여과용pH4-7적IPG효조진행쌍향전영,칙가검측도대약600개단백점,기중유29개단백시상조표체,1개단백시하조표체,5개단백시유도특이표체.2.불동방법제취적가용성단백질량불동.TCA법간단역조작,사호대우감성단백적추제효과경호,재2-DE도상상,감성단현시적단백점다;단차방법소득단백적재용성차.분법제취적단백재용성호,소추제적단백량교대,순도교고.
Rice seedlings were treated in Fe-deficient hydroponic solution for 1d,3d and 5 d respectively. Then soluble proteins in rice leaves were extracted with phenolic or TCA / acetone method, and protein dynamic changes were studied on the Fe-deficient stress by 2-DE analysis. The results depicted as follows:. First, using different pH IPG gel strip leaded to different separation effectiveness. Stained with coomassie brilliant blue, nearly 450 protein spots in a 2-DE gel were detected with the pH 3~10 gradient IPG strip, among which about 89% proteins were acidic ones. However, about 600 spots were tested in a 2-DE gel with the pH4~7 gradient IPG strip. In the 2-DE gel with pH4~7 IPG strip, 29 proteins were up-regulated, only 1 protein was down-regulated, 5 proteins were specially displayed. Second, the quality and quantity of the soluble proteins were different with different extraction methods. TCA technique was easy to operate and effective to distribute basic proteins on the basic apex of 2-DE gels. But the proteins extracted by TCA were difficult to resolve thoroughly. The proteins extracted by phenolic method were more quantitative and purer than that by TCA technique.