物理化学学报
物理化學學報
물이화학학보
ACTA PHYSICO-CHIMICA SINICA
2011年
3期
595-603
,共9页
李敏杰%刘卫霞%彭淳容%陆文聪
李敏傑%劉衛霞%彭淳容%陸文聰
리민걸%류위하%팽순용%륙문총
第一性原理方法%氧化还原电动势%核酸碱基%代谢物%水相
第一性原理方法%氧化還原電動勢%覈痠堿基%代謝物%水相
제일성원리방법%양화환원전동세%핵산감기%대사물%수상
First-principles method%Redox potential%Nucleobases%Metabolites%Aqueous solution
氧化还原电动势是了解核酸中电荷,电子转移过程以及设计具有新型氧化还原活性的碱基类化合物的重要参数.本文对82个芳香化合物的氧化还原电动势进行理论预测,通过计算值和实验值的比较发现:气相采用B3LYP/6-311++G(2df,2p)//B3LYP/6-31+G(d)方法,液相采用HF-COSMORS/UAHF方法,对运用HF-CPCM,UAHF方法在水相重新优化的构型计算溶剂化能,能有效预测芳香化合物水相氧化还原电动势,该理论方法计算的绝对均方根误差(RMSD)为0.124V.运用该理论方法成功预测了属于芳香化合物的核酸碱基及其代谢物的水相氧化还原电动势.根据预测结果,讨论了核酸中电荷,电子转移过程以及结构改变对设计具有新型氧化还原活性的核酸碱基类化合物的影响.本文为设计具有氧化还原活性的新型核酸碱基类化合物提供了一种理论方法.
氧化還原電動勢是瞭解覈痠中電荷,電子轉移過程以及設計具有新型氧化還原活性的堿基類化閤物的重要參數.本文對82箇芳香化閤物的氧化還原電動勢進行理論預測,通過計算值和實驗值的比較髮現:氣相採用B3LYP/6-311++G(2df,2p)//B3LYP/6-31+G(d)方法,液相採用HF-COSMORS/UAHF方法,對運用HF-CPCM,UAHF方法在水相重新優化的構型計算溶劑化能,能有效預測芳香化閤物水相氧化還原電動勢,該理論方法計算的絕對均方根誤差(RMSD)為0.124V.運用該理論方法成功預測瞭屬于芳香化閤物的覈痠堿基及其代謝物的水相氧化還原電動勢.根據預測結果,討論瞭覈痠中電荷,電子轉移過程以及結構改變對設計具有新型氧化還原活性的覈痠堿基類化閤物的影響.本文為設計具有氧化還原活性的新型覈痠堿基類化閤物提供瞭一種理論方法.
양화환원전동세시료해핵산중전하,전자전이과정이급설계구유신형양화환원활성적감기류화합물적중요삼수.본문대82개방향화합물적양화환원전동세진행이론예측,통과계산치화실험치적비교발현:기상채용B3LYP/6-311++G(2df,2p)//B3LYP/6-31+G(d)방법,액상채용HF-COSMORS/UAHF방법,대운용HF-CPCM,UAHF방법재수상중신우화적구형계산용제화능,능유효예측방향화합물수상양화환원전동세,해이론방법계산적절대균방근오차(RMSD)위0.124V.운용해이론방법성공예측료속우방향화합물적핵산감기급기대사물적수상양화환원전동세.근거예측결과,토론료핵산중전하,전자전이과정이급결구개변대설계구유신형양화환원활성적핵산감기류화합물적영향.본문위설계구유양화환원활성적신형핵산감기류화합물제공료일충이론방법.
Redox potentials are of importance in understanding the charge/electron transfer processes involved in nucleic acids. In this study, the protocol of the B3LYP/6-311 ++G(2df,2p)//B3LYP/6-31 +G(d) in gas phase and the HF-COSMORS/UAHF for the solvation energy calculations at the HF-CPCM/UAHF re-optimized solution geometries in aqueous solution, as implemented in the Gaussian 03 programs, has been established to predict the redox potentials of the aromatic compounds in aqueous solution. In comparison with the 82 experimental redox potentials, the root mean square deviation (RMSD) is only 0.124 V. This scheme has been employed successfully to calculate the redox potentials of various nucleobases and the metabolites. The structural and charge/electron transfer impact on the redox potentials was discussed. The implications to the design of new redox-active nucleobase derivatives were suggested.