兽类学报
獸類學報
수류학보
ACTA THERIOLOGICA SINICA
2009年
4期
372-381
,共10页
徐士霞%张盼%李树珍%周开亚%魏辅文%杨光
徐士霞%張盼%李樹珍%週開亞%魏輔文%楊光
서사하%장반%리수진%주개아%위보문%양광
平衡选择%遗传变异%中华白海豚%跨种进化
平衡選擇%遺傳變異%中華白海豚%跨種進化
평형선택%유전변이%중화백해돈%과충진화
Balancing selection%Genetic variation%Indo-Pacific humpback dolphin(Sousa chinensis)%Trans-species evolution
主要组织相容性复合体(Major histocompatibility complex,MHC)基因是由一组紧密连锁的基因组成,是哺乳动物免疫系统中最重要的组成部分.本文选择3个MHC基因座位的第二外元,即:MHC-I类基因和II类基因的DRA和DQB座位,初步调查濒危物种中华白海豚的遗传变异.共鉴定了2个DRA、2个DQB和7个MHC-I等位基因.DRA座位遗传变异非常低,而DQB和MHC-I座位具有相对较高水平的遗传变异.并且,在DQB和MHC-I基因座位的假定的抗原结合位点(Antigen binding sites,ABS),非同义替代明显大于同义替代,提示平衡选择(Balancing selection)维持这两个座位的多态性,而在DRA座位上,并没有检测到平衡选择.系统发生分析表明中华白海豚的MHC等位基因没有聚在一起,而是和其他的物种聚在一起,符合MHC跨种进化(Trans-species evolution)的模式.
主要組織相容性複閤體(Major histocompatibility complex,MHC)基因是由一組緊密連鎖的基因組成,是哺乳動物免疫繫統中最重要的組成部分.本文選擇3箇MHC基因座位的第二外元,即:MHC-I類基因和II類基因的DRA和DQB座位,初步調查瀕危物種中華白海豚的遺傳變異.共鑒定瞭2箇DRA、2箇DQB和7箇MHC-I等位基因.DRA座位遺傳變異非常低,而DQB和MHC-I座位具有相對較高水平的遺傳變異.併且,在DQB和MHC-I基因座位的假定的抗原結閤位點(Antigen binding sites,ABS),非同義替代明顯大于同義替代,提示平衡選擇(Balancing selection)維持這兩箇座位的多態性,而在DRA座位上,併沒有檢測到平衡選擇.繫統髮生分析錶明中華白海豚的MHC等位基因沒有聚在一起,而是和其他的物種聚在一起,符閤MHC跨種進化(Trans-species evolution)的模式.
주요조직상용성복합체(Major histocompatibility complex,MHC)기인시유일조긴밀련쇄적기인조성,시포유동물면역계통중최중요적조성부분.본문선택3개MHC기인좌위적제이외원,즉:MHC-I류기인화II류기인적DRA화DQB좌위,초보조사빈위물충중화백해돈적유전변이.공감정료2개DRA、2개DQB화7개MHC-I등위기인.DRA좌위유전변이비상저,이DQB화MHC-I좌위구유상대교고수평적유전변이.병차,재DQB화MHC-I기인좌위적가정적항원결합위점(Antigen binding sites,ABS),비동의체대명현대우동의체대,제시평형선택(Balancing selection)유지저량개좌위적다태성,이재DRA좌위상,병몰유검측도평형선택.계통발생분석표명중화백해돈적MHC등위기인몰유취재일기,이시화기타적물충취재일기,부합MHC과충진화(Trans-species evolution)적모식.
The major histocompatibility complex (MHC) consists of a group of closely linked genes that constitute the most important genetic component of the mammalian immune system. Exon 2 of three MHC loci,i.e.DQB and DRA of MHC class II, and class I, were chosen to preliminarily characterize the genetic variability of the Indo-Pacific humpback dolphin (Sousa chinensis), an endangered species found in coastal China. The DRA, DQB and MHC-I loci each contained two, two, and seven alleles, respectively. Little sequence variation was detected at the DRA locus, relatively higher at the DQB, but considerable sequence variation at the MHC-I. Relatively high rates of non-synonymous (dN) vs. synonymous (dS) substitution in the antigen binding sites (ABS) suggested balancing selection for maintaining polymorphisms at the MHC-I and DQB loci, although this result was not supported by data from the DRA locus. Phylogenetic reconstruction suggested that three MHC loci exon 2 sequences are not separated according to species, but are intermixed with other species, which was consistent with the trans-species evolution model of the MHC.