应用与环境生物学报
應用與環境生物學報
응용여배경생물학보
CHINESE JOURNAL OF APPLIED & ENVIRONMENTAL BIOLOGY
2009年
5期
585-590
,共6页
陈英%邱琳%涂升斌%栾丽%王兴%龙文波
陳英%邱琳%塗升斌%欒麗%王興%龍文波
진영%구림%도승빈%란려%왕흥%룡문파
SSR%籼稻亲本%遗传多样性%聚类分析
SSR%秈稻親本%遺傳多樣性%聚類分析
SSR%선도친본%유전다양성%취류분석
simple sequence repeats%parents of the indica hybrid rice%genetic diversity%cluster analysis
随机选用分布于水稻(Oryza sativa L.)12条染色体上的110对引物,共筛选出26对具有多态性的SSR引物,对24份杂交籼稻三系亲本材料进行遗传多样性和亲缘关系分析.全部24份亲本中共检测出116对等位基因,每个SSR引物可检测到的等位基因数目为2~7个不等,平均每对引物可以检测到4.4个等位基因.多态信息量(PIC)的变动范围为0.068 9~0.803 6,平均PIC值为0.603 4;期望杂合度(H_e)的变动范围为0.081 6~0.829 8,平均值为0.616 9;多样性指数(1)变幅为0.173 2~1.791 3,平均为1.160 0.对供试亲本材料根据遗传距离进行UPGMA聚类分析,结果表明,SSR微卫星标记可以将24份亲本材料分为3个大群,各组亲本间的遗传差异较大.通过分子标记辅助育种,可以有效地鉴定供试亲本材料之间的亲缘关系,分析预测新种质材料的遗传差异,可作为选育强优势组合杂交水稻的重要参考指标之一.图2表3参24
隨機選用分佈于水稻(Oryza sativa L.)12條染色體上的110對引物,共篩選齣26對具有多態性的SSR引物,對24份雜交秈稻三繫親本材料進行遺傳多樣性和親緣關繫分析.全部24份親本中共檢測齣116對等位基因,每箇SSR引物可檢測到的等位基因數目為2~7箇不等,平均每對引物可以檢測到4.4箇等位基因.多態信息量(PIC)的變動範圍為0.068 9~0.803 6,平均PIC值為0.603 4;期望雜閤度(H_e)的變動範圍為0.081 6~0.829 8,平均值為0.616 9;多樣性指數(1)變幅為0.173 2~1.791 3,平均為1.160 0.對供試親本材料根據遺傳距離進行UPGMA聚類分析,結果錶明,SSR微衛星標記可以將24份親本材料分為3箇大群,各組親本間的遺傳差異較大.通過分子標記輔助育種,可以有效地鑒定供試親本材料之間的親緣關繫,分析預測新種質材料的遺傳差異,可作為選育彊優勢組閤雜交水稻的重要參攷指標之一.圖2錶3參24
수궤선용분포우수도(Oryza sativa L.)12조염색체상적110대인물,공사선출26대구유다태성적SSR인물,대24빈잡교선도삼계친본재료진행유전다양성화친연관계분석.전부24빈친본중공검측출116대등위기인,매개SSR인물가검측도적등위기인수목위2~7개불등,평균매대인물가이검측도4.4개등위기인.다태신식량(PIC)적변동범위위0.068 9~0.803 6,평균PIC치위0.603 4;기망잡합도(H_e)적변동범위위0.081 6~0.829 8,평균치위0.616 9;다양성지수(1)변폭위0.173 2~1.791 3,평균위1.160 0.대공시친본재료근거유전거리진행UPGMA취류분석,결과표명,SSR미위성표기가이장24빈친본재료분위3개대군,각조친본간적유전차이교대.통과분자표기보조육충,가이유효지감정공시친본재료지간적친연관계,분석예측신충질재료적유전차이,가작위선육강우세조합잡교수도적중요삼고지표지일.도2표3삼24
Totally, 24 three-line parents of indica hybrid rice (Oryza sativa L.) were used to analyze their genetic diversity and genetic relationship by using 26 polymorphous primer pairs selected from 110 SSR (Simple sequence repeats) which dispersed on 12 chromosomes in rice. Those primers detected 116 alleles from all the 24 parents. The alleles number might range from 2 to 7 with an average of 4.4. The PIC (Polymorphism index content) value of the polymorphic markers ranged from 0.068 9 to 0.803 6, with average of 0.603 4. The expected heterzygosity (H_e) ranged from 0.081 6 to 0.829 8 and the average was 0.616 9. However, Shannon's information index (Ⅰ) ranged from 0.173 2 to 1.791 3 with average of 1.160 0. Furthermore, according to the results of cluster analysis by UPGMA method, the 24 parents materials were classified into three groups by microsatellite markers, and the parents among the groups showed relatively large genetic variation, which could be used to identify the relationship among the parents, and also to predict the heterosis of new materials by molecule markers assisted selection. The results provide a good reference to the choice of higher heterosis hybrid combinations in rice breeding. Fig 2, Tab 3, Ref 24