生物信息学
生物信息學
생물신식학
BIOINFORMATICS
2006年
2期
57-61
,共5页
电子克隆%烯醇化酶%稻瘟菌
電子剋隆%烯醇化酶%稻瘟菌
전자극륭%희순화매%도온균
In silico cloning%Enolase%Magnaporthe grisea
利用电子克隆技术从稻瘟菌中克隆到一个新的Ⅰ型烯醇化酶全长cDNA,暂命为MgEno-1.MgEno-1全长1571核苷酸,其预测的ORF为1317核苷酸,共编码438个氨基酸.起始密码子ATG位于第53位,终止密码子TAA位于第1369位.序列分析表明该烯醇化酶与丝状真菌中已报道的其它烯醇化酶高度同源,且长度一致,这暗示烯醇化酶基因进化上高度保守,甚至有可能像18SrRNA一样可作为进化尺度.这将是第一个用电子克隆技术从稻瘟菌中克隆到的基因.
利用電子剋隆技術從稻瘟菌中剋隆到一箇新的Ⅰ型烯醇化酶全長cDNA,暫命為MgEno-1.MgEno-1全長1571覈苷痠,其預測的ORF為1317覈苷痠,共編碼438箇氨基痠.起始密碼子ATG位于第53位,終止密碼子TAA位于第1369位.序列分析錶明該烯醇化酶與絲狀真菌中已報道的其它烯醇化酶高度同源,且長度一緻,這暗示烯醇化酶基因進化上高度保守,甚至有可能像18SrRNA一樣可作為進化呎度.這將是第一箇用電子剋隆技術從稻瘟菌中剋隆到的基因.
이용전자극륭기술종도온균중극륭도일개신적Ⅰ형희순화매전장cDNA,잠명위MgEno-1.MgEno-1전장1571핵감산,기예측적ORF위1317핵감산,공편마438개안기산.기시밀마자ATG위우제53위,종지밀마자TAA위우제1369위.서렬분석표명해희순화매여사상진균중이보도적기타희순화매고도동원,차장도일치,저암시희순화매기인진화상고도보수,심지유가능상18SrRNA일양가작위진화척도.저장시제일개용전자극륭기술종도온균중극륭도적기인.
Here we report a novel cDNA clone( MgEno - 1 )encoding α - enolase in rice blast fungus, Magnaporthe grisea ( M. grisea ), acquired by in silico cloning strategy. The MgEno- 1 consists of 1571 base pairs(bp)in length, and was predicted to contain a 1317 bp of open reading framework(ORF) corresponding to 438 deduced amino acids(aa) ,with ATG initial codon and TAA stopping codon at the position of 53and 1369 nucleotide acid, respectively. Sequence analysis of the predicted ORF of MgEno - 1 revealed that it is of the nearly equal length and of high identity to enolase- 1 genes published in the filamentous fungi, implying that it is highly conservative, and even has the potential to serve an evolutionary scale like 18S rRNA. To our knowledge, it will be the first gene cloned from M. grisea using the technique of in silico cloning.