海洋科学进展
海洋科學進展
해양과학진전
JOURNAL OF OCEANOGRAPHY OF HUANGHAI & BOHAI SEAS
2010年
1期
102-106
,共5页
郑明刚%臧家业%张进兴%孙修勤
鄭明剛%臧傢業%張進興%孫脩勤
정명강%장가업%장진흥%손수근
缘管浒苔%ITS序列%序列分析%系统关系
緣管滸苔%ITS序列%序列分析%繫統關繫
연관호태%ITS서렬%서렬분석%계통관계
Enteromorpha linza%ITS sequences%sequence analysis%molecular phylogeny
利用PCR扩增、克隆和测序的方法对青岛市红岛虾池生长的缘管浒苔(Enteromorpha linza)的5.8S rDNA 及其转录间隔区ITS序列进行了分析,并依据ITS序列构建了浒苔属不同种之间的进化树.结果表明,获得了核糖体DNA完整的ITS和5.8S rDNA序列,ITS1为195 bp,5.8S rDNA为155 bp,ITS2为184 bp,总长度GC含量为63%.缘管浒苔与浒苔和曲浒苔的序列差异百分率较小,分别为2.4%和4.6%,与(U.olivascens)的序列差异百分率最大,为16.7%.Kimura-2参数遗传距离结果表明缘管浒苔和浒苔的遗传进化关系较近.
利用PCR擴增、剋隆和測序的方法對青島市紅島蝦池生長的緣管滸苔(Enteromorpha linza)的5.8S rDNA 及其轉錄間隔區ITS序列進行瞭分析,併依據ITS序列構建瞭滸苔屬不同種之間的進化樹.結果錶明,穫得瞭覈糖體DNA完整的ITS和5.8S rDNA序列,ITS1為195 bp,5.8S rDNA為155 bp,ITS2為184 bp,總長度GC含量為63%.緣管滸苔與滸苔和麯滸苔的序列差異百分率較小,分彆為2.4%和4.6%,與(U.olivascens)的序列差異百分率最大,為16.7%.Kimura-2參數遺傳距離結果錶明緣管滸苔和滸苔的遺傳進化關繫較近.
이용PCR확증、극륭화측서적방법대청도시홍도하지생장적연관호태(Enteromorpha linza)적5.8S rDNA 급기전록간격구ITS서렬진행료분석,병의거ITS서렬구건료호태속불동충지간적진화수.결과표명,획득료핵당체DNA완정적ITS화5.8S rDNA서렬,ITS1위195 bp,5.8S rDNA위155 bp,ITS2위184 bp,총장도GC함량위63%.연관호태여호태화곡호태적서렬차이백분솔교소,분별위2.4%화4.6%,여(U.olivascens)적서렬차이백분솔최대,위16.7%.Kimura-2삼수유전거리결과표명연관호태화호태적유전진화관계교근.
Enteromorpha linza is sampled from the shrimp ponds at Hongdao of Qingdao. Its 5.8S rDNA and internal transcribed spacer sequence(ITS) is analyzed. The PCR technology is used for the sequence amplification,clone,and determination. A phylogenetic tree of the various species is set up from the ITS sequences. It is learnt from the results that a complete ITS and 5.8S rDNA sequence is obtained,including 195 bp of ITS1,155 bp of 5.8 SrDNA,and 184 bp of ITS2. Its GC content is 63% of the total seqnence. The difference between E.linza and E.prolifera is 2.4%,it is 4.6% between E.linza and E.flexuosa,and it is 16.7% between E.linza and U.olivascens,the maximum of the three. The Kimur-2 parameter reveals that the genetic relationship between E.linza and E.prolifera is closer.