海洋与湖沼
海洋與湖沼
해양여호소
OCEANOLOGIA ET LIMNOLOGIA SINICA
2013年
2期
371-376
,共6页
滨珊瑚科%ITS区%12S rRNA基因%遗传多样性%系统发生关系
濱珊瑚科%ITS區%12S rRNA基因%遺傳多樣性%繫統髮生關繫
빈산호과%ITS구%12S rRNA기인%유전다양성%계통발생관계
Poritidae%ITS%12S rRNA%genetic diversity%phylogenetic relationship
利用ITS区和12S rRNA基因对广东徐闻地区7种滨珊瑚科珊瑚的遗传多样性和系统发生关系进行了研究。结果表明:(1)基于ITS1检测到在58个样本中有48个单倍型,多样性在0.800-1.000之间,多态位点数在5-62之间,核苷酸多样性指数在0.012-0.094之间;基于 ITS2检测到43个单倍型,多样性在0.742-1.000之间,多态位点数在22-75之间,核苷酸多样性指数在0.017-0.175之间。基于ITS区所得遗传分化系数在?0.00409-0.12170之间(P<0.001),遗传分化不明显,7种珊瑚中,二异角孔珊瑚的遗传多样性最丰富。(2)以12S rRNA基因建立的系统发育树与传统的形态学分类系统基本吻合,7种珊瑚被分成了3个支系,滨珊瑚属3种为一个支系,二异角孔珊瑚为一个支系,其余3种角孔珊瑚为一个支系。
利用ITS區和12S rRNA基因對廣東徐聞地區7種濱珊瑚科珊瑚的遺傳多樣性和繫統髮生關繫進行瞭研究。結果錶明:(1)基于ITS1檢測到在58箇樣本中有48箇單倍型,多樣性在0.800-1.000之間,多態位點數在5-62之間,覈苷痠多樣性指數在0.012-0.094之間;基于 ITS2檢測到43箇單倍型,多樣性在0.742-1.000之間,多態位點數在22-75之間,覈苷痠多樣性指數在0.017-0.175之間。基于ITS區所得遺傳分化繫數在?0.00409-0.12170之間(P<0.001),遺傳分化不明顯,7種珊瑚中,二異角孔珊瑚的遺傳多樣性最豐富。(2)以12S rRNA基因建立的繫統髮育樹與傳統的形態學分類繫統基本吻閤,7種珊瑚被分成瞭3箇支繫,濱珊瑚屬3種為一箇支繫,二異角孔珊瑚為一箇支繫,其餘3種角孔珊瑚為一箇支繫。
이용ITS구화12S rRNA기인대엄동서문지구7충빈산호과산호적유전다양성화계통발생관계진행료연구。결과표명:(1)기우ITS1검측도재58개양본중유48개단배형,다양성재0.800-1.000지간,다태위점수재5-62지간,핵감산다양성지수재0.012-0.094지간;기우 ITS2검측도43개단배형,다양성재0.742-1.000지간,다태위점수재22-75지간,핵감산다양성지수재0.017-0.175지간。기우ITS구소득유전분화계수재?0.00409-0.12170지간(P<0.001),유전분화불명현,7충산호중,이이각공산호적유전다양성최봉부。(2)이12S rRNA기인건립적계통발육수여전통적형태학분류계통기본문합,7충산호피분성료3개지계,빈산호속3충위일개지계,이이각공산호위일개지계,기여3충각공산호위일개지계。
Seven species, 58 samples of Poritidae were selected, the sequence of ITS and partial 12S rRNA were get, to analyze their genetic diversity and phylogenetic relationship. (1) The results of the genetic diversity of the ITS1 shows, 48 haplotypes were detected, the haplotype diversity index was between 0.800-1.000, and the polymorphic loci is between 5-62. The nucleotide diversity index was between 0.012-0.094; the results of ITS2 show that 43 haplotypes were de-tected, haplotype diversity index was between 0.742-1.000. The polymorphic loci was between 22-75, and the nucleo-tide diversity was between 0.017-0.175. Among these seven species, the genetic differentiation index based on the ITS was between ?0.00409-0.12170 (P<0.0124), genetic differentiation was not obvious. Goniopora duofasciat has the highest genetic diversity. (2) The results of phylogenetic relationship based on the 12S rRNA is that 7 species of coral have been were divided into three branches in the phylogenetic tree, three species of Porites were in the same branch. Gonio-pora duofasciat was on separate branch, the other three species of Goniopora were on the other branch. The monophyly is relatively clear in the phylogenetic tree. Among the Porites genus, Porites lutea and Porites pukoensis got together, and Porites nigrescens was on the separate one. Goniopora gracilis and Goniopora minor got together, and Goniopora columna was on the separate one. The phylogenetic tree based on 12S rRNA basically consistent with traditional classification sys-tem.