东北林业大学学报
東北林業大學學報
동북임업대학학보
JOURNAL OF NORTHEAST FORESTRY UNIVERSITY
2013年
10期
69-74
,共6页
梁楠松%曾凡锁%李博%郭梁%詹亚光
樑楠鬆%曾凡鎖%李博%郭樑%詹亞光
량남송%증범쇄%리박%곽량%첨아광
白桦%Tyl-copia类逆转座子%逆转录酶%转录活性%系统进化%异质性%简并杂交寡核苷酸引物
白樺%Tyl-copia類逆轉座子%逆轉錄酶%轉錄活性%繫統進化%異質性%簡併雜交寡覈苷痠引物
백화%Tyl-copia류역전좌자%역전록매%전록활성%계통진화%이질성%간병잡교과핵감산인물
Betula platyphylla Suk.%Ty1-copia-like retrotransposons%Transcriptional activity%Evolution%Heteroge-neity%Consensus Degenerate Hybrid Oligonucleotide Primers ( CODEHOP)
利用 Tyl-copia类逆转座子逆转录酶( RT)的保守区域设计引物,优化了扩增条件后利用RT-PCR从白桦愈伤组织中得到了1条逆转录酶序列。利用硝普钠( SNP)和茉莉酸甲酯( MeJA)诱导后分别扩增克隆了11条和9条逆转录酶序列。这21条逆转录酶序列(命名Bprt1-21)变化范围为205~290 bp,一致性为71.93%,异质性为11.%~50.9%,翻译成氨基酸的异质性为0~57.1%。经SNP和MeJA处理的样品中,获得的逆转录酶序列基本是分别聚类,初步证明不同的Ty1-copia类逆转座子能够分别响应不同的信号而被转录激活。分析所获得的21逆转录酶序列和苹果中19条逆转录转座子序列( DQ410748~DQ410766)进化关系发现,逆转录酶基本各自聚类,但是Bprt9、Bprt11和DQ410750进化关系比较接近,Bprt15、Bprt19、DQ410751和DQ410753聚为一类,证明逆转座子存在水平传递。
利用 Tyl-copia類逆轉座子逆轉錄酶( RT)的保守區域設計引物,優化瞭擴增條件後利用RT-PCR從白樺愈傷組織中得到瞭1條逆轉錄酶序列。利用硝普鈉( SNP)和茉莉痠甲酯( MeJA)誘導後分彆擴增剋隆瞭11條和9條逆轉錄酶序列。這21條逆轉錄酶序列(命名Bprt1-21)變化範圍為205~290 bp,一緻性為71.93%,異質性為11.%~50.9%,翻譯成氨基痠的異質性為0~57.1%。經SNP和MeJA處理的樣品中,穫得的逆轉錄酶序列基本是分彆聚類,初步證明不同的Ty1-copia類逆轉座子能夠分彆響應不同的信號而被轉錄激活。分析所穫得的21逆轉錄酶序列和蘋果中19條逆轉錄轉座子序列( DQ410748~DQ410766)進化關繫髮現,逆轉錄酶基本各自聚類,但是Bprt9、Bprt11和DQ410750進化關繫比較接近,Bprt15、Bprt19、DQ410751和DQ410753聚為一類,證明逆轉座子存在水平傳遞。
이용 Tyl-copia류역전좌자역전록매( RT)적보수구역설계인물,우화료확증조건후이용RT-PCR종백화유상조직중득도료1조역전록매서렬。이용초보납( SNP)화말리산갑지( MeJA)유도후분별확증극륭료11조화9조역전록매서렬。저21조역전록매서렬(명명Bprt1-21)변화범위위205~290 bp,일치성위71.93%,이질성위11.%~50.9%,번역성안기산적이질성위0~57.1%。경SNP화MeJA처리적양품중,획득적역전록매서렬기본시분별취류,초보증명불동적Ty1-copia류역전좌자능구분별향응불동적신호이피전록격활。분석소획득적21역전록매서렬화평과중19조역전록전좌자서렬( DQ410748~DQ410766)진화관계발현,역전록매기본각자취류,단시Bprt9、Bprt11화DQ410750진화관계비교접근,Bprt15、Bprt19、DQ410751화DQ410753취위일류,증명역전좌자존재수평전체。
We designed the primers of reverse transcriptase according to the conserved domains of the Ty1-copia retrotransposons reverse transcriptase.We obtained several fragments of reverse transcriptase from callus of birch by using improved RT-PCR.Eleven and nine fragments were amplified from callus of birch treated by sodium nitroprusside ( SNP) and methyl jasmonate (MeJA), respectively.The length of 21 reverse transcriptase sequences (named Bprt 1-21) is from 205 to 290 bp, with the consistency of 71.93%, the heterogeneity of from 1.1% to 50.9% and the heterogeneity of amino acid se-quences of from 0.0% to 57.1%.The sequences from birch treated by SNP or MeJA are clustered, respectively.The transcription of Ty1-copia-like retrotransposons can be activated by different signals.The analysis of the phylogenetic tree of reverse transcriptase of Ty1-coip a-like retrotransposons between birch and apple revealed each of the reverse transcripta-ses are clustered together, but the evolutional relationship between Bprt9, Bprt11 and DQ410750 are closer.Bprt15, Bprt19, DQ410751 and DQ410753 are clustered together.Therefore, the horizontal transmission can exist in retrotrans-posons.