辽宁师范大学学报(自然科学版)
遼寧師範大學學報(自然科學版)
료녕사범대학학보(자연과학판)
JOURNAL OF LIAONING NORMAL UNIVERSITY(NATURAL SCIENCE)
2013年
3期
369-372
,共4页
碱土离子%核酸碱基%水%量子化学计算%相互作用能%电荷分布
堿土離子%覈痠堿基%水%量子化學計算%相互作用能%電荷分佈
감토리자%핵산감기%수%양자화학계산%상호작용능%전하분포
alkaline-earth cations%nucleic acid bases%water%quantum chemical calculation%interaction energy%charge distribution
采用高水平量子化学方法,MP2/6-311G(d ,p),对气相中的Mg2+/Ca2+与DNA碱基和水的相互作用进行了研究,优化base-M-(H2 O )n (M = M g2+/Ca2+,n=1~2)的几何结构,计算其结合能和电荷分布等性质.结果表明,M g2+与配体碱基及水的距离要比Ca2+与其配体距离更近,M g2+与其配体的平均距离要比Ca2+小0.03 nm左右.M g2+与其配体的结合能要比Ca2+的大60~70 kcal/mol左右,随着水数目的增加,离子与配体的结合能力逐渐减弱,M g2+/Ca2+到水和碱基的平均距离越来越大,但变化幅度较小.金属离子的电荷主要转移到水中.
採用高水平量子化學方法,MP2/6-311G(d ,p),對氣相中的Mg2+/Ca2+與DNA堿基和水的相互作用進行瞭研究,優化base-M-(H2 O )n (M = M g2+/Ca2+,n=1~2)的幾何結構,計算其結閤能和電荷分佈等性質.結果錶明,M g2+與配體堿基及水的距離要比Ca2+與其配體距離更近,M g2+與其配體的平均距離要比Ca2+小0.03 nm左右.M g2+與其配體的結閤能要比Ca2+的大60~70 kcal/mol左右,隨著水數目的增加,離子與配體的結閤能力逐漸減弱,M g2+/Ca2+到水和堿基的平均距離越來越大,但變化幅度較小.金屬離子的電荷主要轉移到水中.
채용고수평양자화학방법,MP2/6-311G(d ,p),대기상중적Mg2+/Ca2+여DNA감기화수적상호작용진행료연구,우화base-M-(H2 O )n (M = M g2+/Ca2+,n=1~2)적궤하결구,계산기결합능화전하분포등성질.결과표명,M g2+여배체감기급수적거리요비Ca2+여기배체거리경근,M g2+여기배체적평균거리요비Ca2+소0.03 nm좌우.M g2+여기배체적결합능요비Ca2+적대60~70 kcal/mol좌우,수착수수목적증가,리자여배체적결합능력축점감약,M g2+/Ca2+도수화감기적평균거리월래월대,단변화폭도교소.금속리자적전하주요전이도수중.
By applying a high-level quantum chemistry (QM ) method ,the interactions between Mg2+ /Ca2+ with DNA bases and water in gas-phase were investigated .The structures ,binding energies and charge distributions of base-M-(H2 O)n (M= Mg2+ /Ca2+ ,n=1~2) were studied .Results show that the distances of Mg2+-base and Mg2+-water are smaller than those of Ca2+ ,and the distances from the Mg2+ to H2O are 0 .03 nm smaller than those of Ca2+-H2O ;the binding energies between Mg2+and its ligands are 60~70 kcal/mol larger than those of Ca2+ .With the increasing number of water molecules ,the interactions between cation and its ligands reduce gradually ,the average distances from Mg2+ /Ca2+ to water and base enlarge gradually and insignificantly ,and the positive charges of Mg2+ /Ca2+ mainly transfer to water .