临床儿科杂志
臨床兒科雜誌
림상인과잡지
2013年
9期
820-824
,共5页
杨蕾%季晨博%史春梅%陈玲%庞玲霞%夏黎%郭锡熔%倪毓辉
楊蕾%季晨博%史春梅%陳玲%龐玲霞%夏黎%郭錫鎔%倪毓輝
양뢰%계신박%사춘매%진령%방령하%하려%곽석용%예육휘
miR-1908%miRNA%生物信息学%人脂肪细胞%肥胖
miR-1908%miRNA%生物信息學%人脂肪細胞%肥胖
miR-1908%miRNA%생물신식학%인지방세포%비반
hsa-miR-1908%miRNA%bioinformatics analysis%human preadipocytes%obesity
目的对hsa-miR-1908进行系统的生物信息学分析,预测其可能参与的生物学过程及信号通路,为深入研究其在人脂肪细胞分化、肥胖发生等过程中的功能与机制奠定基础。方法应用miRBase获取hsa-miR-1908的序列,并分析其特征;应用miRanda预测hsa-miR-1908的靶基因,并取预测结果及基因芯片结果的交集,进一步进行基因功能注释(Gene ontology)和生物通路富集分析(Pathway enrichment)。结果 hsa-miR-1908在各物种之间有一定保守性,其靶基因功能富集于Wnt受体信号的调控、细胞周期、细胞凋亡等生物学过程;其靶基因信号通路富集于促性腺激素释放激素信号通路、MAPK信号通路、胰岛素信号通路、细胞周期等信号转导通路及胰腺癌等疾病通路中。结论 hsa-miR-1908预测的靶基因集合富集于多个信号通路及生物学过程,与肥胖密切相关,为后续has-miR-1908在人脂肪细胞中生物学功能研究奠定基础。
目的對hsa-miR-1908進行繫統的生物信息學分析,預測其可能參與的生物學過程及信號通路,為深入研究其在人脂肪細胞分化、肥胖髮生等過程中的功能與機製奠定基礎。方法應用miRBase穫取hsa-miR-1908的序列,併分析其特徵;應用miRanda預測hsa-miR-1908的靶基因,併取預測結果及基因芯片結果的交集,進一步進行基因功能註釋(Gene ontology)和生物通路富集分析(Pathway enrichment)。結果 hsa-miR-1908在各物種之間有一定保守性,其靶基因功能富集于Wnt受體信號的調控、細胞週期、細胞凋亡等生物學過程;其靶基因信號通路富集于促性腺激素釋放激素信號通路、MAPK信號通路、胰島素信號通路、細胞週期等信號轉導通路及胰腺癌等疾病通路中。結論 hsa-miR-1908預測的靶基因集閤富集于多箇信號通路及生物學過程,與肥胖密切相關,為後續has-miR-1908在人脂肪細胞中生物學功能研究奠定基礎。
목적대hsa-miR-1908진행계통적생물신식학분석,예측기가능삼여적생물학과정급신호통로,위심입연구기재인지방세포분화、비반발생등과정중적공능여궤제전정기출。방법응용miRBase획취hsa-miR-1908적서렬,병분석기특정;응용miRanda예측hsa-miR-1908적파기인,병취예측결과급기인심편결과적교집,진일보진행기인공능주석(Gene ontology)화생물통로부집분석(Pathway enrichment)。결과 hsa-miR-1908재각물충지간유일정보수성,기파기인공능부집우Wnt수체신호적조공、세포주기、세포조망등생물학과정;기파기인신호통로부집우촉성선격소석방격소신호통로、MAPK신호통로、이도소신호통로、세포주기등신호전도통로급이선암등질병통로중。결론 hsa-miR-1908예측적파기인집합부집우다개신호통로급생물학과정,여비반밀절상관,위후속has-miR-1908재인지방세포중생물학공능연구전정기출。
Objective To predict the biological process and signaling pathways in which hsa-miR-1908 might be in-volved by a series of bioinformatics analysis, so as to lay foundations and provide theoretical basis for the further studies of hsa-miR-1908 biological function in human preadipocytes. Methods The sequence of hsa-miR-1908 was acquired from miR-Base database, and target genes of hsa-miR-1908 were predicted by miRanda, and then the intersection of the results and the results of gene-chip as gene set were further analyzed by gene ontology and pathway enrichment. Results The hsa-miR-1908 had some conserved property among different species. The functions of the target genes were enriched in Wnt receptor signal-ing pathway through beta-catenin, cell cycle, cell apeptosis and other biological processes. The GnRH signaling, MAPK sig-naling, insulin signaling, cell cycle signal transduction pathways and signaling pathway in pancreatic cancer were signiifcantly enriched. Conclusions The target genes set of hsa-miR-1908 were enriched in multiple biological process which are related with the obesity. This study provides guidance for the further study in human preadipocytes.