水生生物学报
水生生物學報
수생생물학보
ACTA HYDROBIOLOGICA SINICA
2013年
5期
905-911
,共7页
汪开毓%牟巧凤%黄锦炉%陈德芳%黄凌远%王均%连海
汪開毓%牟巧鳳%黃錦爐%陳德芳%黃凌遠%王均%連海
왕개육%모교봉%황금로%진덕방%황릉원%왕균%련해
维氏气单胞菌%DNA扩增片段长度多态性(AFLP)%基因分型%指纹图谱%聚类分析
維氏氣單胞菌%DNA擴增片段長度多態性(AFLP)%基因分型%指紋圖譜%聚類分析
유씨기단포균%DNA확증편단장도다태성(AFLP)%기인분형%지문도보%취류분석
Aeromonas veronii%Amplified fragment length polymorphism (AFLP)%Genetic diversity%Fingerprint%Clustering analysis
试验通过人工设计合成的通用接头以及与接头序列相匹配的专用引物,对38株维氏气单胞菌分离株和1株维氏气单胞菌标准菌株进行AFLP基因分型研究。结果显示,采用5对引物使39株维氏气单胞菌扩增出1080条可见条带,片段长度在50-1000 bp之间,其中多态性条带727条,平均每对引物组合产生154条多态性条带,平均多态性检出率为66.7%。按UPGMA方法对条带进行聚类分析,建立聚类分支树状图,将39株维氏气单胞菌分为9个基因型,其中第四类群基因Ⅳ型包含了14株菌株,约占总菌数的35.9%,分布在5个不同的地区,推测其可能是引起斑点叉尾发病的主要流行性基因型。不同地区分离的维氏气单胞菌具有地域性差异,而同一地区分离株既存在相同基因型现象,也存在基因型多样性现象。
試驗通過人工設計閤成的通用接頭以及與接頭序列相匹配的專用引物,對38株維氏氣單胞菌分離株和1株維氏氣單胞菌標準菌株進行AFLP基因分型研究。結果顯示,採用5對引物使39株維氏氣單胞菌擴增齣1080條可見條帶,片段長度在50-1000 bp之間,其中多態性條帶727條,平均每對引物組閤產生154條多態性條帶,平均多態性檢齣率為66.7%。按UPGMA方法對條帶進行聚類分析,建立聚類分支樹狀圖,將39株維氏氣單胞菌分為9箇基因型,其中第四類群基因Ⅳ型包含瞭14株菌株,約佔總菌數的35.9%,分佈在5箇不同的地區,推測其可能是引起斑點扠尾髮病的主要流行性基因型。不同地區分離的維氏氣單胞菌具有地域性差異,而同一地區分離株既存在相同基因型現象,也存在基因型多樣性現象。
시험통과인공설계합성적통용접두이급여접두서렬상필배적전용인물,대38주유씨기단포균분리주화1주유씨기단포균표준균주진행AFLP기인분형연구。결과현시,채용5대인물사39주유씨기단포균확증출1080조가견조대,편단장도재50-1000 bp지간,기중다태성조대727조,평균매대인물조합산생154조다태성조대,평균다태성검출솔위66.7%。안UPGMA방법대조대진행취류분석,건립취류분지수상도,장39주유씨기단포균분위9개기인형,기중제사류군기인Ⅳ형포함료14주균주,약점총균수적35.9%,분포재5개불동적지구,추측기가능시인기반점차미발병적주요류행성기인형。불동지구분리적유씨기단포균구유지역성차이,이동일지구분리주기존재상동기인형현상,야존재기인형다양성현상。
The AFLP genotyping about 38 Aeromonas veronii isolates and an Aeromonas veronii standard strain was conducted by synthetic universal joints and adapters which matched the specific primers. The results showed that the 39 strains of Aeromonas veronii augmentation were out 1080 visible strips by five selected primers. The lengths of the segments ranged from 50 to 1000 bp. Seven hundred and twenty seven of the total strips were polymorphism. Each primer combinations produced 154 bands in average. Average detection rate for polymorphism was 66.7%. By UPGMA method to strip the clustering analysis, a clustering branches tree, Aeromonas veronii was obviously divided into nine classes. The fourth group Ⅳ type contains genes 14 strains isolated, accounted for about 35.9% of the total bacterial count, distributed in five different areas. Presumably, it may be the major epidemic genotype of case disease to channel catfish. Aeromonas veronii had regional differences. And Aeromonas veronii in the same area showed genotype diver-sity.