南昌大学学报(理科版)
南昌大學學報(理科版)
남창대학학보(이과판)
JOURNAL OF NANCHANG UNIVERSITY(NATURAL SCIENCE)
2014年
4期
386-394
,共9页
侯喜洋%肖芳美%熊文芳%史建伍%吴娣%辜清%洪一江
侯喜洋%肖芳美%熊文芳%史建伍%吳娣%辜清%洪一江
후희양%초방미%웅문방%사건오%오제%고청%홍일강
细胞色素P4 5 0%池蝶蚌%序列分析
細胞色素P4 5 0%池蝶蚌%序列分析
세포색소P4 5 0%지접방%서렬분석
CytochromeP450%Hyriopsis schlegelii%Sequence analysis
在实验室已获得的池蝶蚌(Hyriopsis schlegelii)部分细胞色素 P450基因序列的基础上,运用 RACE PCR的方法获得池蝶蚌细胞色素CYP基因(定义为 Hs-CYP450)的全长 cDNA。运用相关生物软件和在线软件对 Hs-CYP450基因序列以及其蛋白的一、二、三级结构进行了初步分析。结果显示,Hs-CYP450基因全长1809 bp, ORF框1431bp,共编码476个氨基酸;氨基酸组成成分中亮氨酸(Leu)含量最多,约9.5%,而最少的则是色氨酸,仅0.8%;通过疏水性分析显示,该蛋白属亲水性可溶性蛋白;二级结构预测显示该蛋白α螺旋(H)结构含量较多,约占46.22%,并均匀分布在蛋白中;β折叠(E)相对较少,约9.87%左右,多分布在两端。建立的系统进化树结果表明,Hs-CYP450基因序列与其他动物的细胞色素CYP基因有较高的同源性,在众多物种中和太平洋牡蛎(Cras-sostrea gigas)同源性相对较高。
在實驗室已穫得的池蝶蚌(Hyriopsis schlegelii)部分細胞色素 P450基因序列的基礎上,運用 RACE PCR的方法穫得池蝶蚌細胞色素CYP基因(定義為 Hs-CYP450)的全長 cDNA。運用相關生物軟件和在線軟件對 Hs-CYP450基因序列以及其蛋白的一、二、三級結構進行瞭初步分析。結果顯示,Hs-CYP450基因全長1809 bp, ORF框1431bp,共編碼476箇氨基痠;氨基痠組成成分中亮氨痠(Leu)含量最多,約9.5%,而最少的則是色氨痠,僅0.8%;通過疏水性分析顯示,該蛋白屬親水性可溶性蛋白;二級結構預測顯示該蛋白α螺鏇(H)結構含量較多,約佔46.22%,併均勻分佈在蛋白中;β摺疊(E)相對較少,約9.87%左右,多分佈在兩耑。建立的繫統進化樹結果錶明,Hs-CYP450基因序列與其他動物的細胞色素CYP基因有較高的同源性,在衆多物種中和太平洋牡蠣(Cras-sostrea gigas)同源性相對較高。
재실험실이획득적지접방(Hyriopsis schlegelii)부분세포색소 P450기인서렬적기출상,운용 RACE PCR적방법획득지접방세포색소CYP기인(정의위 Hs-CYP450)적전장 cDNA。운용상관생물연건화재선연건대 Hs-CYP450기인서렬이급기단백적일、이、삼급결구진행료초보분석。결과현시,Hs-CYP450기인전장1809 bp, ORF광1431bp,공편마476개안기산;안기산조성성분중량안산(Leu)함량최다,약9.5%,이최소적칙시색안산,부0.8%;통과소수성분석현시,해단백속친수성가용성단백;이급결구예측현시해단백α라선(H)결구함량교다,약점46.22%,병균균분포재단백중;β절첩(E)상대교소,약9.87%좌우,다분포재량단。건립적계통진화수결과표명,Hs-CYP450기인서렬여기타동물적세포색소CYP기인유교고적동원성,재음다물충중화태평양모려(Cras-sostrea gigas)동원성상대교고。
In this study,Hs-CYP450 was cloned from by the method of RACE PCR.Then,relevant biologi-cal softwares and online softwares were used to make a preliminary analysis of Hs-CYP450 gene sequence, as well as the primary,secondary and tertiary structures of this protein.Our results indicated that the Hs-CYP450 cDNA present a full length of 1809bp that consisted of an open reading frame (ORF)of 1 431 bp encoding a protein of 476 amino acids,The content of leucine (Leu)accounted for 9.5% in the protein,but tryptophan content was only 0.8%;The hydrophobicity analysis showed that this protein was a hydrophilic soluble protein;The prediction of secondary structure suggested thatαhelix (H)content was 46.22% and distributed evenly in the protein;βfold (E)was about 9.87% and was located at both ends.The results of phylogenetic tree showed that Hs-CYP450 gene sequence had a high homology with other animals CYP gene,and the Crassostrea gigas shared the highest among these species.