应用海洋学学报
應用海洋學學報
응용해양학학보
Journal of Applied Oceanography
2014年
2期
284-289
,共6页
郭书林%陈信忠%肖懿哲%朱苏琴%龚艳清%杨俊萍
郭書林%陳信忠%肖懿哲%硃囌琴%龔豔清%楊俊萍
곽서림%진신충%초의철%주소금%공염청%양준평
海洋生物学%包纳米虫%派琴虫%TaqMan MGB探针%双重实时荧光PCR
海洋生物學%包納米蟲%派琴蟲%TaqMan MGB探針%雙重實時熒光PCR
해양생물학%포납미충%파금충%TaqMan MGB탐침%쌍중실시형광PCR
marine biology%Bonamia sp.%Perkinsus sp.%TaqMan MGB probe%duplex real time PCR
根据包纳米虫(Bonamia sp.)SSU rDNA和派琴虫(Perkinsus sp.)ITS rDNA的保守区序列,设计特异性引物和Taqman MGB探针,建立了同时检测上述两种贝类原虫的双重实时荧光PCR方法.该方法可检测到包纳米虫基因的446拷贝质粒,以及派琴虫基因的171拷贝质粒,具有较高的灵敏度.以10倍系列稀释的包纳米虫阳性标准品质粒和派琴虫阳性标准品质粒为模板,测得该方法的定量标准曲线相关系数分别为0.999和1.000,显示出很好的扩增效率.同时该方法与尼氏单孢子虫(Haplosporidium nelsoni)、沿岸单孢子虫(H.costale)等其他贝类原虫,以及副溶血性弧菌(Vibrio parahaemolyticus)、迟缓爱德华氏菌(Edwardsiella tarda)和#爱德华氏菌(E.ictaluri)等海水养殖常见致病菌之间无交叉反应,表现出较高的特异性.福建莆田的湄州湾、平海湾、兴化湾等地采集的296份贝类临床样本的检测证明,该方法是一种有效的快速检测鉴定上述2种贝类原虫的方法,具有良好的灵敏度和特异性,可广泛应用于海洋贝类原虫感染情况调查,以及贝类疫病检疫监控等领域.
根據包納米蟲(Bonamia sp.)SSU rDNA和派琴蟲(Perkinsus sp.)ITS rDNA的保守區序列,設計特異性引物和Taqman MGB探針,建立瞭同時檢測上述兩種貝類原蟲的雙重實時熒光PCR方法.該方法可檢測到包納米蟲基因的446拷貝質粒,以及派琴蟲基因的171拷貝質粒,具有較高的靈敏度.以10倍繫列稀釋的包納米蟲暘性標準品質粒和派琴蟲暘性標準品質粒為模闆,測得該方法的定量標準麯線相關繫數分彆為0.999和1.000,顯示齣很好的擴增效率.同時該方法與尼氏單孢子蟲(Haplosporidium nelsoni)、沿岸單孢子蟲(H.costale)等其他貝類原蟲,以及副溶血性弧菌(Vibrio parahaemolyticus)、遲緩愛德華氏菌(Edwardsiella tarda)和#愛德華氏菌(E.ictaluri)等海水養殖常見緻病菌之間無交扠反應,錶現齣較高的特異性.福建莆田的湄州灣、平海灣、興化灣等地採集的296份貝類臨床樣本的檢測證明,該方法是一種有效的快速檢測鑒定上述2種貝類原蟲的方法,具有良好的靈敏度和特異性,可廣汎應用于海洋貝類原蟲感染情況調查,以及貝類疫病檢疫鑑控等領域.
근거포납미충(Bonamia sp.)SSU rDNA화파금충(Perkinsus sp.)ITS rDNA적보수구서렬,설계특이성인물화Taqman MGB탐침,건립료동시검측상술량충패류원충적쌍중실시형광PCR방법.해방법가검측도포납미충기인적446고패질립,이급파금충기인적171고패질립,구유교고적령민도.이10배계렬희석적포납미충양성표준품질립화파금충양성표준품질립위모판,측득해방법적정량표준곡선상관계수분별위0.999화1.000,현시출흔호적확증효솔.동시해방법여니씨단포자충(Haplosporidium nelsoni)、연안단포자충(H.costale)등기타패류원충,이급부용혈성호균(Vibrio parahaemolyticus)、지완애덕화씨균(Edwardsiella tarda)화#애덕화씨균(E.ictaluri)등해수양식상견치병균지간무교차반응,표현출교고적특이성.복건보전적미주만、평해만、흥화만등지채집적296빈패류림상양본적검측증명,해방법시일충유효적쾌속검측감정상술2충패류원충적방법,구유량호적령민도화특이성,가엄범응용우해양패류원충감염정황조사,이급패류역병검역감공등영역.
A duplex TaqMan MGB real-time PCR method was optimized to simultaneously detect Perkinsus sp.and Bonamia sp..The primers and TaqMan MGB probes were designed and chosen to amplify the conserved SSU seg-ment of genus Bonamia sp.ribosomal DNA and ITS segment of genus Perkinsus sp.ribosomal DNA.The duplex real-time PCR identified and differentiated the two protozoan parasite groups.The sensitivity of the duplex real-time PCR assay was 446 and 171 template copies and it had higher sensitivity.Tenfold serial dilutions of the plasmid DNAs of Bonamia sp.and Perkinsus sp.were quantified the actual copy numbers using the duplex real-time PCR.The corre-lation coefficient of calibration curves were 0.999 and 1 .000,respectively.Meanwhile,this method had no cross reaction with other species of protozoa in mollusks and the common pathogenic bacteria in mariculture.The method showed advantages of rapid and high efficiency when applied to detect 296 clinical specimens from Meizhou bay, Pinghai bay and Xinghua bay of Fujian.This assay is proved to be sensitive and specific and can be widely used for the protozoan infection survey,disease surveillance and the quarantine of shell fish.