寄生虫与医学昆虫学报
寄生蟲與醫學昆蟲學報
기생충여의학곤충학보
ACTA PARASITOLOGICA ET MEDICA ENTOMOLOGICA SINICA
2014年
1期
48-53
,共6页
刘润吉%张荣波%李明%刘丽娟%呼满霞%王静%曹晓梅%郭天宇%张晓龙
劉潤吉%張榮波%李明%劉麗娟%呼滿霞%王靜%曹曉梅%郭天宇%張曉龍
류윤길%장영파%리명%류려연%호만하%왕정%조효매%곽천우%장효룡
COⅠ基因%DNA条形码%黑瞎子岛%鼠种
COⅠ基因%DNA條形碼%黑瞎子島%鼠種
COⅠ기인%DNA조형마%흑할자도%서충
COⅠ gene%DNA Barcoding%Heixiazi Island%Rat
为了探索基于COⅠ基因的DNA条形码技术在鼠类鉴定中的应用,本研究检测了黑瞎子岛地区2科3属4种41只鼠类的COⅠ基因序列,进行比对分析,基于Kimura双参数模型计算种内种间遗传距离,用NJ法构建系统发育树,结果表明种间遗传距离显著大于种内遗传距离,聚类分析表现为很短的种内分支和较长的种间分支,同种个体聚为高支持度的单一分支。5只红背Clethrionomys rutilus 被误判为棕背 Clethrionomys rufocanus,24只莫氏田鼠Microtus maximowiczii被误判为东方田鼠Microtus fortis,1只大林姬鼠Apodemus peninsulae被误判为东方田鼠。研究结果表明, DNA条形码不仅能够纠正形态学鉴定中的错误,还能鉴别形态相近的近缘种。基于COⅠ基因的DNA条形码技术能够方便、快捷、准确的鉴定鼠类。
為瞭探索基于COⅠ基因的DNA條形碼技術在鼠類鑒定中的應用,本研究檢測瞭黑瞎子島地區2科3屬4種41隻鼠類的COⅠ基因序列,進行比對分析,基于Kimura雙參數模型計算種內種間遺傳距離,用NJ法構建繫統髮育樹,結果錶明種間遺傳距離顯著大于種內遺傳距離,聚類分析錶現為很短的種內分支和較長的種間分支,同種箇體聚為高支持度的單一分支。5隻紅揹Clethrionomys rutilus 被誤判為棕揹 Clethrionomys rufocanus,24隻莫氏田鼠Microtus maximowiczii被誤判為東方田鼠Microtus fortis,1隻大林姬鼠Apodemus peninsulae被誤判為東方田鼠。研究結果錶明, DNA條形碼不僅能夠糾正形態學鑒定中的錯誤,還能鑒彆形態相近的近緣種。基于COⅠ基因的DNA條形碼技術能夠方便、快捷、準確的鑒定鼠類。
위료탐색기우COⅠ기인적DNA조형마기술재서류감정중적응용,본연구검측료흑할자도지구2과3속4충41지서류적COⅠ기인서렬,진행비대분석,기우Kimura쌍삼수모형계산충내충간유전거리,용NJ법구건계통발육수,결과표명충간유전거리현저대우충내유전거리,취류분석표현위흔단적충내분지화교장적충간분지,동충개체취위고지지도적단일분지。5지홍배Clethrionomys rutilus 피오판위종배 Clethrionomys rufocanus,24지막씨전서Microtus maximowiczii피오판위동방전서Microtus fortis,1지대림희서Apodemus peninsulae피오판위동방전서。연구결과표명, DNA조형마불부능구규정형태학감정중적착오,환능감별형태상근적근연충。기우COⅠ기인적DNA조형마기술능구방편、쾌첩、준학적감정서류。
To explore the application of DNA barcoding in the identification of rats, the mitochondrial cytochrome c oxidase subunit I genes of 41 rats from Heixiazi Island, belonging to 2 families, 3 generas and 4 species, were amplified.Blast comparisons were made in NCBI.The Intraspecific genetic distance and interspecific genetic distance were calculated with MEGA 5.0 based on Kimura double parameter model.The NJ tree was ultimately carried out.The results indicated that the interspecific genetic distance was remarkably greater than the intraspecific genetic distance .The phylogenetic analysis suggested that the lengths of interspecific branches were much longer than those of intraspecific branches.The rat samples of the same species constituted monophyletic groups .5 Clethrionomys rutilus rats were based on morphologic characters as Clethrionomys rufocanus.24 Microtus maximowiczii rats were based on morphologic characters as Microtus fortis.One Apodemus peninsulae rat was misidentified as Microtus fortis.Our research indicated that DNA barcode can not only identify correctly without morphological diagnoses, but also identify allied species.DNA barcoding based on COⅠgene can provide convenient and accurate identification of rats.