水生生物学报
水生生物學報
수생생물학보
ACTA HYDROBIOLOGICA SINICA
2013年
4期
669-677
,共9页
刘丽%刘海情%郭昱嵩%王中铎%刘楚吾
劉麗%劉海情%郭昱嵩%王中鐸%劉楚吾
류려%류해정%곽욱숭%왕중탁%류초오
蛇鳄龟%微卫星标记%磁珠富集法%遗传多样性
蛇鱷龜%微衛星標記%磁珠富集法%遺傳多樣性
사악구%미위성표기%자주부집법%유전다양성
Chelydra serpentina%Microsatellite markers%Magnetic bead hybridization enrichment%Genetic diversity
利用磁珠富集法,以生物素标记的(CA)15为探针,构建了蛇鳄龟(Chelydra serpentina L.)微卫星富集文库。通过PCR法从富集文库中共筛选出70条微卫星序列,一共设计了48对微卫星引物,采用PCR扩增的方法从中筛选出36对引物,对一个蛇鳄龟养殖群体进行遗传多样性分析。通过分析,36个位点获得的等位基因数从2-9不等,平均为4.361,有效等位基因为1.461-7.767,平均为3.498。等位基因片段大小为56-342 bp,观测杂合度为0.067-1.000,平均为0.725;期望杂合度为0.316-0.850,平均0.600;多态信息含量为0.2655-0.8359,平均为0.5573;结果表明此蛇鳄龟养殖群体存在较高的遗传多样性水平。群体内固定系数?0.688-0.856,平均为?0.214,说明蛇鳄龟群体中杂合子过剩。
利用磁珠富集法,以生物素標記的(CA)15為探針,構建瞭蛇鱷龜(Chelydra serpentina L.)微衛星富集文庫。通過PCR法從富集文庫中共篩選齣70條微衛星序列,一共設計瞭48對微衛星引物,採用PCR擴增的方法從中篩選齣36對引物,對一箇蛇鱷龜養殖群體進行遺傳多樣性分析。通過分析,36箇位點穫得的等位基因數從2-9不等,平均為4.361,有效等位基因為1.461-7.767,平均為3.498。等位基因片段大小為56-342 bp,觀測雜閤度為0.067-1.000,平均為0.725;期望雜閤度為0.316-0.850,平均0.600;多態信息含量為0.2655-0.8359,平均為0.5573;結果錶明此蛇鱷龜養殖群體存在較高的遺傳多樣性水平。群體內固定繫數?0.688-0.856,平均為?0.214,說明蛇鱷龜群體中雜閤子過剩。
이용자주부집법,이생물소표기적(CA)15위탐침,구건료사악구(Chelydra serpentina L.)미위성부집문고。통과PCR법종부집문고중공사선출70조미위성서렬,일공설계료48대미위성인물,채용PCR확증적방법종중사선출36대인물,대일개사악구양식군체진행유전다양성분석。통과분석,36개위점획득적등위기인수종2-9불등,평균위4.361,유효등위기인위1.461-7.767,평균위3.498。등위기인편단대소위56-342 bp,관측잡합도위0.067-1.000,평균위0.725;기망잡합도위0.316-0.850,평균0.600;다태신식함량위0.2655-0.8359,평균위0.5573;결과표명차사악구양식군체존재교고적유전다양성수평。군체내고정계수?0.688-0.856,평균위?0.214,설명사악구군체중잡합자과잉。
To isolate and identify polymorphic microsatellite markers which would be used for evaluating the genetic diversity of Chelydra serpentina L. An enriched microsatellite library of C. serpentina was constructed by the mag-netic-bead enrichment method used biotinylated (CA)15 probe. Screened the enriched microsatellite library by PCR am-plification technique, seventy microsatellite sequences were obtained. To analyze genetic diversity of a cultured C. ser-pentina, forty eight pairs of primers were designed on the basis of the microsatellite sequences and 36 of that were screened by PCR amplification technique. In these microsatellite loci, the number of alleles per locus ranged from two to nine with an average of 4.361. The number of effective allele ranged from 1.461 to 7.767 with an average of 3.498. The size of allele fragment ranged between 56 and 342 bp. The observed heterozygosity varied from 0.067 to 1.000 with an average of 0.725. The expected heterozygosity varied from 0.316 to 0.850 with an average of 0.600. Polymorphism information content (PIC) ranged from 0.2655 to 0.8359 with an average of 0.5573. The average fixation index coeffi-cient of population was ?0.214, which suggested surplus heterozygotes in the population. These results indicated that the cultured C. serpentina populations have relatively high genetic diversity.