现代农业科技
現代農業科技
현대농업과기
XIANDAIHUA NONGYE
2013年
22期
58-61,64
,共5页
刘兴地%李明芳%郑楷%郑学勤
劉興地%李明芳%鄭楷%鄭學勤
류흥지%리명방%정해%정학근
MYB%无核荔枝%基因克隆%系统进化树
MYB%無覈荔枝%基因剋隆%繫統進化樹
MYB%무핵려지%기인극륭%계통진화수
MY B%seedless litchi%gene cloning%phylogenic tree
为获得在无核荔枝中胚珠退化过程中差异表达全长MY B转录因子基因,并为其功能研究打下基础,根据从已构建的无核荔枝胚珠败育SSH消减文库中得到的差异表达的MY B转录因子EST序列,提取高质量的总RNA,运用SMART RACE技术,获得一个1177bp的MY B基因核苷酸序列。生物信息学分析表明,该序列含有879 bp的开放阅读框,推测的蛋白质为292个氨基酸,具有2个SANT结构功能域,在系统发育树上与大豆MY B基因亲缘关系最近。该基因为MY B基因家族中的新成员。
為穫得在無覈荔枝中胚珠退化過程中差異錶達全長MY B轉錄因子基因,併為其功能研究打下基礎,根據從已構建的無覈荔枝胚珠敗育SSH消減文庫中得到的差異錶達的MY B轉錄因子EST序列,提取高質量的總RNA,運用SMART RACE技術,穫得一箇1177bp的MY B基因覈苷痠序列。生物信息學分析錶明,該序列含有879 bp的開放閱讀框,推測的蛋白質為292箇氨基痠,具有2箇SANT結構功能域,在繫統髮育樹上與大豆MY B基因親緣關繫最近。該基因為MY B基因傢族中的新成員。
위획득재무핵려지중배주퇴화과정중차이표체전장MY B전록인자기인,병위기공능연구타하기출,근거종이구건적무핵려지배주패육SSH소감문고중득도적차이표체적MY B전록인자EST서렬,제취고질량적총RNA,운용SMART RACE기술,획득일개1177bp적MY B기인핵감산서렬。생물신식학분석표명,해서렬함유879 bp적개방열독광,추측적단백질위292개안기산,구유2개SANT결구공능역,재계통발육수상여대두MY B기인친연관계최근。해기인위MY B기인가족중적신성원。
To obtain the full length of MY B gene and lay the foundation its function research that was differentially expressed in ovule degeneration of seedless litchi. The EST encoding MY B was obtained from young abortive ovule of seedless litchi via SSH(suppression subtractive hybridization),high quality total RNA was extracted and obtained a 1 177 bp full length cDNA sequence by SMAT-RACE method,bioinformatics analysis showed that it included an 879 bp open reading frame,encoded a deduced protein with 292 amino acids,and contained 2 SANT domains,phylogenetic tree showed it got the closest relatives with Glycine max. The results showed that it's a new member of the MY B family.