基因组学与应用生物学
基因組學與應用生物學
기인조학여응용생물학
Genomics and Applied Biology
2012年
2期
141-146
,共6页
刘阳%史燕%朱新平%赵建%周贵谭%洪孝友
劉暘%史燕%硃新平%趙建%週貴譚%洪孝友
류양%사연%주신평%조건%주귀담%홍효우
中华鳖%微卫星%遗传多样性%种群分化
中華鱉%微衛星%遺傳多樣性%種群分化
중화별%미위성%유전다양성%충군분화
Trionyx sinensis%Microsatellite%Genetic diversity%Population differentiation
利用微卫星分子标记技术对洞庭(DT)、黄河(HH)、黄沙(HS)、日本(RB)以及洞庭(DT)与黄河(HH)的杂交子代(DT♀×HH♂)绿卡(LK)5个中华鳖群体的150个个体进行遗传多样性分析。11对微卫星引物扩增出的等位基因数为3~6个,平均等位基因数为4.1818。5个种群相比,绿卡(LK)的平均有效等位基因数、平均期望杂合度、平均观测杂合度和平均多态信息含量最高,分别是2.3969、0.5274、0.5545和0.4660。对种群间的遗传分化分析表明,黄河(HH)和洞庭(DT)之间的遗传分化最小,为0.0233,而洞庭(DT)和日本(RB)之间的遗传分化最大,为0.0969。基于Nei's遗传距离构建的UPGMA系统进化树显示黄河(HH)和洞庭(DT)及其子代绿卡(LK)亲缘关系较近,而与黄沙(HS)和日本(RB)的亲缘关系较远,最远的为日本(RB)群体。
利用微衛星分子標記技術對洞庭(DT)、黃河(HH)、黃沙(HS)、日本(RB)以及洞庭(DT)與黃河(HH)的雜交子代(DT♀×HH♂)綠卡(LK)5箇中華鱉群體的150箇箇體進行遺傳多樣性分析。11對微衛星引物擴增齣的等位基因數為3~6箇,平均等位基因數為4.1818。5箇種群相比,綠卡(LK)的平均有效等位基因數、平均期望雜閤度、平均觀測雜閤度和平均多態信息含量最高,分彆是2.3969、0.5274、0.5545和0.4660。對種群間的遺傳分化分析錶明,黃河(HH)和洞庭(DT)之間的遺傳分化最小,為0.0233,而洞庭(DT)和日本(RB)之間的遺傳分化最大,為0.0969。基于Nei's遺傳距離構建的UPGMA繫統進化樹顯示黃河(HH)和洞庭(DT)及其子代綠卡(LK)親緣關繫較近,而與黃沙(HS)和日本(RB)的親緣關繫較遠,最遠的為日本(RB)群體。
이용미위성분자표기기술대동정(DT)、황하(HH)、황사(HS)、일본(RB)이급동정(DT)여황하(HH)적잡교자대(DT♀×HH♂)록잡(LK)5개중화별군체적150개개체진행유전다양성분석。11대미위성인물확증출적등위기인수위3~6개,평균등위기인수위4.1818。5개충군상비,록잡(LK)적평균유효등위기인수、평균기망잡합도、평균관측잡합도화평균다태신식함량최고,분별시2.3969、0.5274、0.5545화0.4660。대충군간적유전분화분석표명,황하(HH)화동정(DT)지간적유전분화최소,위0.0233,이동정(DT)화일본(RB)지간적유전분화최대,위0.0969。기우Nei's유전거리구건적UPGMA계통진화수현시황하(HH)화동정(DT)급기자대록잡(LK)친연관계교근,이여황사(HS)화일본(RB)적친연관계교원,최원적위일본(RB)군체。
In this paper,microsatellite markers were used to analyze the genetic diversity of 150 individuals from five Trionyx sinensis populations:Dongting(DT),Yellow River(HH),Huangsha(HS),Japan(RB),and Luka(LK) which is the filial generation of Dongting(DT) and Yellow River(HH),The number of alleles amplified from 11 pairs of microsatellite primers is 3 to 6,and the mean allele number is 4.181 8.The mean effective number of alleles(Ne),mean expected heterozygosity(HE),mean observed heterozygosity(HO) and mean polymorphism information content in LK population are all the highest among these five populations,and there are 2.396 9,0.554 5,0.527 4,and 0.466 0 respectively.FST index between every two populations at all loci indicates that the genetic differentiation between HH and DT is the smallest,0.023 3;while the genetic differentiation between DT and RB is the largest,0.096 9.The UPGMA dendrogram based on Nei's genetic distance shows that DT,HH and LK are grouped in one cluster,which is then clustered with HS.The RB population is grouped in a separate cluster.