基因组学与应用生物学
基因組學與應用生物學
기인조학여응용생물학
Genomics and Applied Biology
2012年
2期
133-140
,共8页
孙科军%刘希良%王开卓%陈敦学%褚武英%陈韬%张建社%成嘉
孫科軍%劉希良%王開卓%陳敦學%褚武英%陳韜%張建社%成嘉
손과군%류희량%왕개탁%진돈학%저무영%진도%장건사%성가
斑鳜%肌肉生长抑制素%启动子%序列分析
斑鱖%肌肉生長抑製素%啟動子%序列分析
반궐%기육생장억제소%계동자%서렬분석
Golden Mandarin Fish(Siniperca scherzeri)%Myostatin%Promoter%Tail-PCR
采用Tail-PCR和常规PCR技术首次克隆出斑鳜myostatin基因及其启动子序列。经生物信息学分析发现,斑鳜myostatin基因由3个外显子和2个内含子组成,编码区1131bp,共编码376个氨基酸。斑鳜myostatin启动子区域大小为840bp,存在1个TATAA-box、4个E-box和1个CAAT-box作用元件。利用软件CLUSTALW和MEGA3.1构建14种硬骨鱼的myostatin启动子的系统进化树结果表明:斑鳜同大口黑鲈亲缘关系最近,与鲤鱼和缨野鲮亲缘关系较远,其结果与传统形态学分类中的亲缘关系一致。斑鳜myostatin基因及其启动子克隆与特征分析,将为进一步研究鱼类myostatin基因的表达调控及其功能分析提供参考。
採用Tail-PCR和常規PCR技術首次剋隆齣斑鱖myostatin基因及其啟動子序列。經生物信息學分析髮現,斑鱖myostatin基因由3箇外顯子和2箇內含子組成,編碼區1131bp,共編碼376箇氨基痠。斑鱖myostatin啟動子區域大小為840bp,存在1箇TATAA-box、4箇E-box和1箇CAAT-box作用元件。利用軟件CLUSTALW和MEGA3.1構建14種硬骨魚的myostatin啟動子的繫統進化樹結果錶明:斑鱖同大口黑鱸親緣關繫最近,與鯉魚和纓野鯪親緣關繫較遠,其結果與傳統形態學分類中的親緣關繫一緻。斑鱖myostatin基因及其啟動子剋隆與特徵分析,將為進一步研究魚類myostatin基因的錶達調控及其功能分析提供參攷。
채용Tail-PCR화상규PCR기술수차극륭출반궐myostatin기인급기계동자서렬。경생물신식학분석발현,반궐myostatin기인유3개외현자화2개내함자조성,편마구1131bp,공편마376개안기산。반궐myostatin계동자구역대소위840bp,존재1개TATAA-box、4개E-box화1개CAAT-box작용원건。이용연건CLUSTALW화MEGA3.1구건14충경골어적myostatin계동자적계통진화수결과표명:반궐동대구흑로친연관계최근,여리어화영야릉친연관계교원,기결과여전통형태학분류중적친연관계일치。반궐myostatin기인급기계동자극륭여특정분석,장위진일보연구어류myostatin기인적표체조공급기공능분석제공삼고。
The sequences of myostatin gene and its promoter in Golden Mandarin Fish(Siniperca scherzeri),for the first time,were cloned through the conventional PCR and Tail-PCR technology.Bioinformatics analysis shows that the myostatin gene consists of three exons and two introns and the coding region is 1 131 bp encoding 376 amino acid residues.The nucleotide sequence analysis shows that myostatin promoter is 840 bp and contains several regulatory elements,such as one TATAA-box,four E-boxes and one CAAT-box.The phylogenetic tree of the myostatin gene promoters from 14 teleost species was constructed with CLUSTALW and MEGA3.1.The result indicates that Golden Mandarin Fish(Siniperca scherzeri) has a closer phylogenetic relationship with Largemouth bass(Micropterus salmoides),but it is far from Cyprinus carpio and Labeo fimbriatus.This result is consistent with general morphological taxonomy.This study would contribute to the further research on the regulation of myostatin expression and the function of myostatin in teleost fish.