中国水产科学
中國水產科學
중국수산과학
Journal of Fishery Sciences of China
2013年
4期
859-868
,共10页
坛紫菜%“申福2号”%微卫星DNA标记%品系鉴定
罈紫菜%“申福2號”%微衛星DNA標記%品繫鑒定
단자채%“신복2호”%미위성DNA표기%품계감정
Porphyra haitanensis%SF-2%SSR marker%strain identification
利用微卫星(SSR)分子标记技术,对坛紫菜(Porphyra haitanensis)优良品系“申福2号”的丝状体和叶状体分别进行了特异性分子标记鉴定,结果发现:用9#引物(序列为 F: TCACAATGGGTGATATGGC; R: CCACAT TTAAGTCCGACTCTG)对“申福2号”丝状体的DNA进行扩增,出现了能区别于其他14个品系(6个优良品系,3个杂交品系,5个野生品系)的特异性条带。用该引物对室内培养的“申福2号”叶状体的DNA进行扩增,也均获得了与丝状体相同的特异性条带。此外,用该引物分别对栽培在不同海区和不同时期采收的“申福2号”叶状体进行验证,结果均出现了与丝状体相同的特异性条带。该特异性条带的DNA测序结果证实,9#引物产生的SSR标记反映了微卫星DNA重复序列的变化。通过 SSR Hunter软件搜索到了设计引物时的核心序列,所得产物大小在预期长度范围内,是特异性扩增。通过 BLAST 比对得知,该序列在核酸数据库中没有同源序列,是一个新序列。通过DNAMAN软件分析得知,“申福2号”、“申福1号”之间序列差异较小,与坛紫菜霞浦野生种差异较大。这证实该标记反映的是种内品系间的差异,可以用于种内品系鉴定。上述结果表明,由9#引物扩增出的这一特异性条带可以认为是“申福2号”丝状体和叶状体的特异性标记,可用于该品系的种质鉴定。
利用微衛星(SSR)分子標記技術,對罈紫菜(Porphyra haitanensis)優良品繫“申福2號”的絲狀體和葉狀體分彆進行瞭特異性分子標記鑒定,結果髮現:用9#引物(序列為 F: TCACAATGGGTGATATGGC; R: CCACAT TTAAGTCCGACTCTG)對“申福2號”絲狀體的DNA進行擴增,齣現瞭能區彆于其他14箇品繫(6箇優良品繫,3箇雜交品繫,5箇野生品繫)的特異性條帶。用該引物對室內培養的“申福2號”葉狀體的DNA進行擴增,也均穫得瞭與絲狀體相同的特異性條帶。此外,用該引物分彆對栽培在不同海區和不同時期採收的“申福2號”葉狀體進行驗證,結果均齣現瞭與絲狀體相同的特異性條帶。該特異性條帶的DNA測序結果證實,9#引物產生的SSR標記反映瞭微衛星DNA重複序列的變化。通過 SSR Hunter軟件搜索到瞭設計引物時的覈心序列,所得產物大小在預期長度範圍內,是特異性擴增。通過 BLAST 比對得知,該序列在覈痠數據庫中沒有同源序列,是一箇新序列。通過DNAMAN軟件分析得知,“申福2號”、“申福1號”之間序列差異較小,與罈紫菜霞浦野生種差異較大。這證實該標記反映的是種內品繫間的差異,可以用于種內品繫鑒定。上述結果錶明,由9#引物擴增齣的這一特異性條帶可以認為是“申福2號”絲狀體和葉狀體的特異性標記,可用于該品繫的種質鑒定。
이용미위성(SSR)분자표기기술,대단자채(Porphyra haitanensis)우량품계“신복2호”적사상체화협상체분별진행료특이성분자표기감정,결과발현:용9#인물(서렬위 F: TCACAATGGGTGATATGGC; R: CCACAT TTAAGTCCGACTCTG)대“신복2호”사상체적DNA진행확증,출현료능구별우기타14개품계(6개우량품계,3개잡교품계,5개야생품계)적특이성조대。용해인물대실내배양적“신복2호”협상체적DNA진행확증,야균획득료여사상체상동적특이성조대。차외,용해인물분별대재배재불동해구화불동시기채수적“신복2호”협상체진행험증,결과균출현료여사상체상동적특이성조대。해특이성조대적DNA측서결과증실,9#인물산생적SSR표기반영료미위성DNA중복서렬적변화。통과 SSR Hunter연건수색도료설계인물시적핵심서렬,소득산물대소재예기장도범위내,시특이성확증。통과 BLAST 비대득지,해서렬재핵산수거고중몰유동원서렬,시일개신서렬。통과DNAMAN연건분석득지,“신복2호”、“신복1호”지간서렬차이교소,여단자채하포야생충차이교대。저증실해표기반영적시충내품계간적차이,가이용우충내품계감정。상술결과표명,유9#인물확증출적저일특이성조대가이인위시“신복2호”사상체화협상체적특이성표기,가용우해품계적충질감정。
Microsatellite DNA (SSR) Marker was used to identify both conchocelis and gametophytic blades of the SF-2 strain of Porphyra haitanensis. Results showed that: A specific band was amplified by 9# primer-pair in conchocelis DNA of the SF-2 strain, which was significantly different from those in other 14 strains of P. haita-nensis and also presented in the gametophytic blades of the SF-2 strain cultured in the laboratory. When the primer-pair was applied to discriminate SF-2 blades from the other cultivars in the Porphyra cultivation ground, the SSR marker showed the same results whatever the blades cultured at different cultivation grounds or harvested at different times. Analysis on DNA sequences of the specific bands showed that the SSR markers amplified by 9# primer-pair reflected the changes of simple sequence repeats. Respected motif sequences had been searched out by the software of SSR Hunter and the products were within the prospective lengths when the primer-pair was de-signed. The sequence turned out to be a new sequence because no similar sequence was found in the NCBI nucleic acid database by BLAST. Analysis of sequences by DNAMAN software showed that there were fewer differences between “SF-2” and “SF-1” but more differences compared to “WT-xp” cultivated in Xiapu, Fujian Province. Therefore, it was confirmed that the SSR marker reflected the differences between strains and could be used to identify intra-specific strains. All the above showed that the specific DNA band amplified by 9# primer-pair was the specific SSR marker in both conchocelis and gametophytic blades of the SF-2 strain and could be used to identify the SF-2 strain from the current cultivars of P. haitanensis.