热带生物学报
熱帶生物學報
열대생물학보
JOURNAL OF SOUTH CHINA UNIVERSITY OF TROPICAL AGRICULTURE
2012年
3期
208-215
,共8页
罗轶奇%李娟玲%刘国民%成善汉%潘学峰%翟丽艳
囉軼奇%李娟玲%劉國民%成善漢%潘學峰%翟麗豔
라질기%리연령%류국민%성선한%반학봉%적려염
苦丁茶冬青%RAPD标记%优化%性别鉴定
苦丁茶鼕青%RAPD標記%優化%性彆鑒定
고정다동청%RAPD표기%우화%성별감정
Ilex kudingcha C. J. Tseng%RAPD marker%optimization%sex identification
通过正交试验设计对影响苦丁茶冬青RAPD-PCR反应的5种因素4水平进行优化试验,最终确定苦丁茶冬青RAPD—PCR的最佳反应体系为:在25μL反应体系中,DNA模板20ng,Mg2+ 2.5mmol·L-1,引物浓度为0.3μmol·L-1,Taq聚合酶浓度为2.0U,dNTPs浓度为200μmol·L-1。最佳的RAPD-PCR扩增程序为:94℃预变性5min,然后94℃变性30s,36℃退火30s,72℃延伸120s,进行40个循环,最后72℃延伸10min;4℃保存。然后通过RAPD技术筛选了91条随机引物,共计有24条引物能在雌/雄DNA/样品池间显示多态性,其中引物S164和S191分别扩增得到2个雄性特异标记S164—900和S191—800。经多次重复实验,RAPD标记均能在雄性个体中稳定出现,故此标记可应用于苦丁茶冬青性别的早期鉴定。
通過正交試驗設計對影響苦丁茶鼕青RAPD-PCR反應的5種因素4水平進行優化試驗,最終確定苦丁茶鼕青RAPD—PCR的最佳反應體繫為:在25μL反應體繫中,DNA模闆20ng,Mg2+ 2.5mmol·L-1,引物濃度為0.3μmol·L-1,Taq聚閤酶濃度為2.0U,dNTPs濃度為200μmol·L-1。最佳的RAPD-PCR擴增程序為:94℃預變性5min,然後94℃變性30s,36℃退火30s,72℃延伸120s,進行40箇循環,最後72℃延伸10min;4℃保存。然後通過RAPD技術篩選瞭91條隨機引物,共計有24條引物能在雌/雄DNA/樣品池間顯示多態性,其中引物S164和S191分彆擴增得到2箇雄性特異標記S164—900和S191—800。經多次重複實驗,RAPD標記均能在雄性箇體中穩定齣現,故此標記可應用于苦丁茶鼕青性彆的早期鑒定。
통과정교시험설계대영향고정다동청RAPD-PCR반응적5충인소4수평진행우화시험,최종학정고정다동청RAPD—PCR적최가반응체계위:재25μL반응체계중,DNA모판20ng,Mg2+ 2.5mmol·L-1,인물농도위0.3μmol·L-1,Taq취합매농도위2.0U,dNTPs농도위200μmol·L-1。최가적RAPD-PCR확증정서위:94℃예변성5min,연후94℃변성30s,36℃퇴화30s,72℃연신120s,진행40개순배,최후72℃연신10min;4℃보존。연후통과RAPD기술사선료91조수궤인물,공계유24조인물능재자/웅DNA/양품지간현시다태성,기중인물S164화S191분별확증득도2개웅성특이표기S164—900화S191—800。경다차중복실험,RAPD표기균능재웅성개체중은정출현,고차표기가응용우고정다동청성별적조기감정。
An orthogonal design was made to optimize RAPD-PCR amplification system of llex kudingcha in 5 factors ( DNA template, Mg2 + , primer, dNTPs, Taq polymerase) at 4 levels, respectively. Through comprehen- sive analysis, an optimized RAPD-PCR reaction system, was established: 10× buffer 2.5 μL, 20 ng DNA tem- plate, 2.5 mmol·L- 1 Mg: + , 0.3 μmol·L - 1 primers, 2.0 U Taq polymerase, and 200 μmol· L-1 dNTPs in the 25 μL reaction system, and the optimized RAPD-PCR amplification program: predenaturing at 94 ℃ for 5 min, then denaturing at 94 ℃ for 30 s, elongation at 36 ℃ for 30 s and extension at 72 ℃ for 120 s, running for 40 cycles, and final extension at 72 ℃ for 10 min. The products were stored at 4 ℃. Furthermore, a total number of 91 random primers were screened in the RAPD-PCR. Polymorphic fragments were detected with 24 primers in female and male DNA samples pools. Two male-associated fragments (S164-900 and S191-800) were respectively generated with S164 primer and S191 primer. Repeated experiments indicated that these RAPD markers appeared stably in male individuals. So these RAPD markers can be applied to identify the sex of the young plantlets of Ilex kudingcha C. J. Tseng at the early stage.