中国麻业科学
中國痳業科學
중국마업과학
PLANT FIBER SCIENCES IN CHINA
2013年
3期
113-117
,共5页
付莉莉%刘头明%朱四元%汤清明%唐守伟
付莉莉%劉頭明%硃四元%湯清明%唐守偉
부리리%류두명%주사원%탕청명%당수위
苎麻%WRKY转录因子%序列聚类分析%进化树分析
苧痳%WRKY轉錄因子%序列聚類分析%進化樹分析
저마%WRKY전록인자%서렬취류분석%진화수분석
ramie%WRKY transcription factors%sequence alignment%phylogenetic analysis
本研究通过分析苎麻转录组中的基因注释,首次筛选出8个苎麻WRKY转录因子基因序列。结合拟南芥、水稻、大豆和小麦等作物的10个已报道具有抗旱功能的WRKY转录因子序列进行聚类分析,发现这10个具有抗旱功能的WRKY基因和苎麻的8个WRKY基因的蛋白质编码序列高度保守。利用MEGA软件进一步构建这18个WRKY基因的蛋白质序列进化树,结果发现18个WRKY转录因子可以分为4组,其中Unigene5705与CL3777.Contig1和大豆的Gm-WRKY13同属一组,即WRKY-1类;而Unigene5211 CL5210.Contig1, Unigene14199和拟南芥的AtWRKY2同属WRKY-2类;两个苎麻WRKY基因( Unigene22787和Unigene29108)则和六个已报道的抗旱WRKY基因( AtWRKY57, OsWRKY08, OsWRKY11, OsWRKY72, GmWRKY21和GmWRKY54)同属 WRKY -3类; CL34.Contig1, TcWRKY53和 ABO3/AtWRKY63同属WRKY-4组。由于所有10个拟南芥、水稻、大豆和小麦WRKY基因具有抗旱功能,因此我们推测苎麻的这8个WRKY转录因子很可能也具有抗旱调控功能。
本研究通過分析苧痳轉錄組中的基因註釋,首次篩選齣8箇苧痳WRKY轉錄因子基因序列。結閤擬南芥、水稻、大豆和小麥等作物的10箇已報道具有抗旱功能的WRKY轉錄因子序列進行聚類分析,髮現這10箇具有抗旱功能的WRKY基因和苧痳的8箇WRKY基因的蛋白質編碼序列高度保守。利用MEGA軟件進一步構建這18箇WRKY基因的蛋白質序列進化樹,結果髮現18箇WRKY轉錄因子可以分為4組,其中Unigene5705與CL3777.Contig1和大豆的Gm-WRKY13同屬一組,即WRKY-1類;而Unigene5211 CL5210.Contig1, Unigene14199和擬南芥的AtWRKY2同屬WRKY-2類;兩箇苧痳WRKY基因( Unigene22787和Unigene29108)則和六箇已報道的抗旱WRKY基因( AtWRKY57, OsWRKY08, OsWRKY11, OsWRKY72, GmWRKY21和GmWRKY54)同屬 WRKY -3類; CL34.Contig1, TcWRKY53和 ABO3/AtWRKY63同屬WRKY-4組。由于所有10箇擬南芥、水稻、大豆和小麥WRKY基因具有抗旱功能,因此我們推測苧痳的這8箇WRKY轉錄因子很可能也具有抗旱調控功能。
본연구통과분석저마전록조중적기인주석,수차사선출8개저마WRKY전록인자기인서렬。결합의남개、수도、대두화소맥등작물적10개이보도구유항한공능적WRKY전록인자서렬진행취류분석,발현저10개구유항한공능적WRKY기인화저마적8개WRKY기인적단백질편마서렬고도보수。이용MEGA연건진일보구건저18개WRKY기인적단백질서렬진화수,결과발현18개WRKY전록인자가이분위4조,기중Unigene5705여CL3777.Contig1화대두적Gm-WRKY13동속일조,즉WRKY-1류;이Unigene5211 CL5210.Contig1, Unigene14199화의남개적AtWRKY2동속WRKY-2류;량개저마WRKY기인( Unigene22787화Unigene29108)칙화륙개이보도적항한WRKY기인( AtWRKY57, OsWRKY08, OsWRKY11, OsWRKY72, GmWRKY21화GmWRKY54)동속 WRKY -3류; CL34.Contig1, TcWRKY53화 ABO3/AtWRKY63동속WRKY-4조。유우소유10개의남개、수도、대두화소맥WRKY기인구유항한공능,인차아문추측저마적저8개WRKY전록인자흔가능야구유항한조공공능。
In this research , we screened 8 ramie WRKY transcription factor genesequences for the first time by analyzing transcriptome gene annotation.10 WRKY transcription factor sequences related to the function of drought resistance have been reported in arabidopsis , rice, soybean and wheat etc.The 18 gene coding sequences were highly conserved by cluster analysis.We constructed the WRKY gene phylogenetic tree by MEGA software for these 18 WRKY genes , and found that the 18 WRKY transcrip-tion factors could be divided into four groups: Unigene5705 , CL3777.Contig1 and GmWRKY13 were classified into the WRKY -1 group; Unigene5211, CL5210.Contig1, Unigene14199 and AtWRKY2 were classified into WRKY -2 group; Unigene22787, Unigene29108, AtWRKY57, OsWRKY08, Os-WRKY11 , OsWRKY72 , GmWRKY21 and GmWRKY54 were classified into WRKY -3 group;CL34.Contig1 , TcWRKY53 and ABO3/AtWRKY63 was classified into WRKY-4 group.Since that the function of drought tolerance of 10 WRKY TFs had been characterized , we suggested that these 8 ramie WRKY TFs probably have the potential of drought -tolerance function.