江西师范大学学报(自然科学版)
江西師範大學學報(自然科學版)
강서사범대학학보(자연과학판)
JOURNAL OF JIANGXI NORMAL UNIVERSITY(NATURAL SCIENCES EDITION)
2014年
3期
319-323
,共5页
万倩%陈献雄%孙新%钟政荣%刘志刚
萬倩%陳獻雄%孫新%鐘政榮%劉誌剛
만천%진헌웅%손신%종정영%류지강
粉尘螨 Der f4%生物信息学%克隆
粉塵螨 Der f4%生物信息學%剋隆
분진만 Der f4%생물신식학%극륭
Dermatophagoides farinae Der f4%bioinformatics%clone
从深圳地区采集粉尘螨纯培养,提取总RNA,根据香港中文大学合成的尘螨基因序列并设计的引物,RT-PCR扩增出Der f4基因,克隆到pUC57载体后测序和进行生物信息学分析.将该目的基因克隆到pET-28a表达载体上得到重组质粒pET-28a-Der f4.用生物软件分析尘螨变应原Der f4序列. RT-PCR获得目的基因Der f4 cDNA全长为1593 bp.推测编码蛋白由526个氨基酸组成,生物信息学分析表明,Der f4具有多种磷酸化位点,含有信号肽,为疏水性蛋白,包含淀粉酶抑制剂功能结构域.获得Der f4基因全长,其编码的细胞外疏水性蛋白可能具有淀粉酶抑制剂活性.
從深圳地區採集粉塵螨純培養,提取總RNA,根據香港中文大學閤成的塵螨基因序列併設計的引物,RT-PCR擴增齣Der f4基因,剋隆到pUC57載體後測序和進行生物信息學分析.將該目的基因剋隆到pET-28a錶達載體上得到重組質粒pET-28a-Der f4.用生物軟件分析塵螨變應原Der f4序列. RT-PCR穫得目的基因Der f4 cDNA全長為1593 bp.推測編碼蛋白由526箇氨基痠組成,生物信息學分析錶明,Der f4具有多種燐痠化位點,含有信號肽,為疏水性蛋白,包含澱粉酶抑製劑功能結構域.穫得Der f4基因全長,其編碼的細胞外疏水性蛋白可能具有澱粉酶抑製劑活性.
종심수지구채집분진만순배양,제취총RNA,근거향항중문대학합성적진만기인서렬병설계적인물,RT-PCR확증출Der f4기인,극륭도pUC57재체후측서화진행생물신식학분석.장해목적기인극륭도pET-28a표체재체상득도중조질립pET-28a-Der f4.용생물연건분석진만변응원Der f4서렬. RT-PCR획득목적기인Der f4 cDNA전장위1593 bp.추측편마단백유526개안기산조성,생물신식학분석표명,Der f4구유다충린산화위점,함유신호태,위소수성단백,포함정분매억제제공능결구역.획득Der f4기인전장,기편마적세포외소수성단백가능구유정분매억제제활성.
RNA was extracted from Shenzhen area and the full-length of Der f4 gene was amplified by RT-PCR with the primers designed according to previous sequence published in Hong Kong chinese university. The target gene was cloned into pUC57 plasmid and sequenced Der f4 gene was recombinated into pET-28 a expression vector fol-lowing sequencing identification. And then Der f4 protein was characterized by bioinformatics software. The opening reading frame( ORF)of Der f4 was obtained by RT-PCR and was 1 593 bp in full length. The protein encoded by this sequence was deduced to be consisted with 526 amino acids. Bioinformatics analysis of Der f4 which proved to be hydrophobic proteins associated with amylase inhibitors function structure domain contained signal peptide and multiple phosphorylation site. The full-length cDNA for Der f4 obtained,which should en-code a hydrophobic extra-cellular protein associated with inhibition of amylase.