吉林农业大学学报
吉林農業大學學報
길임농업대학학보
JOURNAL OF JILIN AGRICUL TURAL UNIVERSITY
2014年
5期
524-529
,共6页
夏纬跃%卢宝慧%杨丽娜%南楠%刘燕妮%陈长卿%高洁
夏緯躍%盧寶慧%楊麗娜%南楠%劉燕妮%陳長卿%高潔
하위약%로보혜%양려나%남남%류연니%진장경%고길
烟草野火病菌%Rep-PCR体系优化%分子多态性
煙草野火病菌%Rep-PCR體繫優化%分子多態性
연초야화병균%Rep-PCR체계우화%분자다태성
Pseudomonas syringae pv. tabaci%optimization of Rep-PCR reaction system%molecular polymorphism
为研究烟草野火病菌的群体遗传多样性,采用正交试验方法,对5个多态性引物( REP,ERIC,BOX, J3,IS1112)的Rep-PCR反应体系分别进行了优化,同时优化了体系中的Mg2+、dNTP、rTaq 酶等几个因素,并在此基础上对来源于吉林省不同地区的70株烟草野火病菌进行了分子多态性分析。结果表明:优化的PCR反应体系电泳图谱清晰,多态性丰富,重复性好,适合烟草野火病菌群体分子标记研究。通过聚类分析发现,吉林省烟草野火病菌群体存在分子多态性,在遗传相似系数为0?9时,70个菌株被聚为4个类群( G1~G4),其中G1类群最大(39个菌株,占55?71%),而G3类群最小,仅包括2个菌株。 G1和G2类群分别包含了5个和3个亚群。不同类群和亚群的菌株地理来源存在多样性。
為研究煙草野火病菌的群體遺傳多樣性,採用正交試驗方法,對5箇多態性引物( REP,ERIC,BOX, J3,IS1112)的Rep-PCR反應體繫分彆進行瞭優化,同時優化瞭體繫中的Mg2+、dNTP、rTaq 酶等幾箇因素,併在此基礎上對來源于吉林省不同地區的70株煙草野火病菌進行瞭分子多態性分析。結果錶明:優化的PCR反應體繫電泳圖譜清晰,多態性豐富,重複性好,適閤煙草野火病菌群體分子標記研究。通過聚類分析髮現,吉林省煙草野火病菌群體存在分子多態性,在遺傳相似繫數為0?9時,70箇菌株被聚為4箇類群( G1~G4),其中G1類群最大(39箇菌株,佔55?71%),而G3類群最小,僅包括2箇菌株。 G1和G2類群分彆包含瞭5箇和3箇亞群。不同類群和亞群的菌株地理來源存在多樣性。
위연구연초야화병균적군체유전다양성,채용정교시험방법,대5개다태성인물( REP,ERIC,BOX, J3,IS1112)적Rep-PCR반응체계분별진행료우화,동시우화료체계중적Mg2+、dNTP、rTaq 매등궤개인소,병재차기출상대래원우길림성불동지구적70주연초야화병균진행료분자다태성분석。결과표명:우화적PCR반응체계전영도보청석,다태성봉부,중복성호,괄합연초야화병균군체분자표기연구。통과취류분석발현,길림성연초야화병균군체존재분자다태성,재유전상사계수위0?9시,70개균주피취위4개류군( G1~G4),기중G1류군최대(39개균주,점55?71%),이G3류군최소,부포괄2개균주。 G1화G2류군분별포함료5개화3개아군。불동류군화아군적균주지리래원존재다양성。
To study the population genetic diversity of Pseudomonas syringae pv. tabaci, the orthogo?nal design of L9(34)was used to optimize PCR reaction system factors including Mg2+,dNTP,rTaq DNA polymerase and primers of five polymorphic primers(REP,ERIC,BOX,J3 and IS1112). Mo?lecular polymorphism of 70 strains isolated from different areas in Jilin province was analyzed using the optimized Rep-PCR system. The results showed clear electrophoresis, high polymorphism and stable repeatability with the optimized Rep-PCR system which was suitable for study of molecular polymorphism of P. syringae pv. tabaci. The clustering results revealed that molecular polymorphism existed in the population of P. syringae pv. tabaci from Jilin province. The tested 70 strains were clustered into four groups ( G1—G4) with 0?9 of genetic similarity coefficient, in which G1 group was the most ( 39 strains,55?71%) , while G3 group was the least ( only 2 strains) . The groups G1 and G2 were separated into five and three subgroups, respectively. For geographical origin of strains in different groups and subgroups, diversity exists.