大连海洋大学学报
大連海洋大學學報
대련해양대학학보
JOURNAL OF DALIAN FISHERIES UNIVERSITY
2014年
5期
449-453
,共5页
姬南京%常亚青%高银雪%赵冲%宋坚
姬南京%常亞青%高銀雪%趙遲%宋堅
희남경%상아청%고은설%조충%송견
仿刺参%ITS1序列%遗传多样性%遗传分化
倣刺參%ITS1序列%遺傳多樣性%遺傳分化
방자삼%ITS1서렬%유전다양성%유전분화
Apostichopus japonicus%ITS1 sequences%genetic diversity%genetic differentiation
利用核糖体DNA第一内转录间隔区(Internal transcribed spacer 1, ITS1)序列,对中国大连(CD)、朝鲜罗津( KN)和俄罗斯海参崴( RV)仿刺参Apostichopus japonicus 3个群体的遗传结构进行分析。结果表明:经PCR扩增、克隆测序,获得长度为517~519 bp、524 bp两种类型的ITS1核苷酸序列,平均G+C含量(64.5%)显著高于A+T含量(35.5%);在仿刺参30个个体61条序列中共检测到49个变异位点,多态位点比例为9.33%,其中有4个简约信息位点,共有40种基因型,群体共享基因型为2个;遗传多样性分析表明,3个群体的遗传多样性丰富;分子方差分析显示,88.65%的变异来自于群体内部,群体间遗传分化较弱或中度分化;根据群体间遗传距离进行的聚类分析发现, KN群体与RV群体的亲缘关系较近, CD群体与KN、 RV群体的亲缘关系较远。
利用覈糖體DNA第一內轉錄間隔區(Internal transcribed spacer 1, ITS1)序列,對中國大連(CD)、朝鮮囉津( KN)和俄囉斯海參崴( RV)倣刺參Apostichopus japonicus 3箇群體的遺傳結構進行分析。結果錶明:經PCR擴增、剋隆測序,穫得長度為517~519 bp、524 bp兩種類型的ITS1覈苷痠序列,平均G+C含量(64.5%)顯著高于A+T含量(35.5%);在倣刺參30箇箇體61條序列中共檢測到49箇變異位點,多態位點比例為9.33%,其中有4箇簡約信息位點,共有40種基因型,群體共享基因型為2箇;遺傳多樣性分析錶明,3箇群體的遺傳多樣性豐富;分子方差分析顯示,88.65%的變異來自于群體內部,群體間遺傳分化較弱或中度分化;根據群體間遺傳距離進行的聚類分析髮現, KN群體與RV群體的親緣關繫較近, CD群體與KN、 RV群體的親緣關繫較遠。
이용핵당체DNA제일내전록간격구(Internal transcribed spacer 1, ITS1)서렬,대중국대련(CD)、조선라진( KN)화아라사해삼외( RV)방자삼Apostichopus japonicus 3개군체적유전결구진행분석。결과표명:경PCR확증、극륭측서,획득장도위517~519 bp、524 bp량충류형적ITS1핵감산서렬,평균G+C함량(64.5%)현저고우A+T함량(35.5%);재방자삼30개개체61조서렬중공검측도49개변이위점,다태위점비례위9.33%,기중유4개간약신식위점,공유40충기인형,군체공향기인형위2개;유전다양성분석표명,3개군체적유전다양성봉부;분자방차분석현시,88.65%적변이래자우군체내부,군체간유전분화교약혹중도분화;근거군체간유전거리진행적취류분석발현, KN군체여RV군체적친연관계교근, CD군체여KN、 RV군체적친연관계교원。
The genetic diversity and genetic differentiation were studied in three wild populations of sea cucumber Apostichopus japonicus from Dalian China ( CD) ,Rajin North Korea ( KN) and Vladivostok Russia( RV) by internal transcribed spacer 1(ITS1). Two different length of ITS1 sequence (517-519 bp and 524 bp) were obtained via cloning and sequencing of PCR products, with higher mean contents of G+C ( 64. 5%) than those of A+T (35. 5%). There were 49 variation sites from 61 sequences in the 3 populations, with polymorphic sites of 9. 33%, and 4 parisimony informative among 40 genotypes including 2 shared genotypes. Genetic diversity parame-ters showed high genetic diversity among populations. The fixation indices (FST) of analysis of molecular variance (AMOVA) within populations was found to be 88. 65%,indicating that the three populations had weak or only moderately genetic differentiation. The molecular phylogenetic tree constructed with NJ method based on genetic distance revealed that there was closer linkage between KN population and RV population than between them and CD population.