中华微生物学和免疫学杂志
中華微生物學和免疫學雜誌
중화미생물학화면역학잡지
CHINESE JOURNAL OF MICROBIOLOGY AND IMMUNOLOGY
2012年
12期
1011-1014
,共4页
戚新%李归冀%章旭%张坤莲%李晓丰
慼新%李歸冀%章旭%張坤蓮%李曉豐
척신%리귀기%장욱%장곤련%리효봉
HLA-A*31∶22%新等位基因%序列分析
HLA-A*31∶22%新等位基因%序列分析
HLA-A*31∶22%신등위기인%서렬분석
HLA-A * 31 ∶ 22%Novel allele%Sequencing-based typing
目的 序列分析及确认一例中国人群中的人类白细胞抗原(human leukocyte antigen,HLA)新等位基因.方法 应用基于Luminex平台的聚合酶链反应-序列特异性寡核苷酸探针(PCR-SSOP)基因分型法、PCR产物测序法和组特异性引物测序法,通过软件分析该样本DNA基因序列及与最相近HLA等位基因序列的差异.结果 PCR-SSOP结果显示该样本HLA-A基因座的反应格局与已知HLA-A等位基因均不一致;DNA序列分析显示,在所检测的第2~4外显子中,该样本HLA-A基因座序列与所有已知HLA-A等位基因序列均不一致,与同源性最高的等位基因A*31∶01∶02的差异只在外显子2区域中产生了nt 245 A—C一个碱基取代,并导致相应的82位密码子由GAG→GCG,编码的氨基酸由谷氨酸(Glu)变为丙氨酸(Ala).结论 该基因为HLA新等位基因,被世界卫生组织HLA因子命名委员会正式命名为HLA-A*31∶22.
目的 序列分析及確認一例中國人群中的人類白細胞抗原(human leukocyte antigen,HLA)新等位基因.方法 應用基于Luminex平檯的聚閤酶鏈反應-序列特異性寡覈苷痠探針(PCR-SSOP)基因分型法、PCR產物測序法和組特異性引物測序法,通過軟件分析該樣本DNA基因序列及與最相近HLA等位基因序列的差異.結果 PCR-SSOP結果顯示該樣本HLA-A基因座的反應格跼與已知HLA-A等位基因均不一緻;DNA序列分析顯示,在所檢測的第2~4外顯子中,該樣本HLA-A基因座序列與所有已知HLA-A等位基因序列均不一緻,與同源性最高的等位基因A*31∶01∶02的差異隻在外顯子2區域中產生瞭nt 245 A—C一箇堿基取代,併導緻相應的82位密碼子由GAG→GCG,編碼的氨基痠由穀氨痠(Glu)變為丙氨痠(Ala).結論 該基因為HLA新等位基因,被世界衛生組織HLA因子命名委員會正式命名為HLA-A*31∶22.
목적 서렬분석급학인일례중국인군중적인류백세포항원(human leukocyte antigen,HLA)신등위기인.방법 응용기우Luminex평태적취합매련반응-서렬특이성과핵감산탐침(PCR-SSOP)기인분형법、PCR산물측서법화조특이성인물측서법,통과연건분석해양본DNA기인서렬급여최상근HLA등위기인서렬적차이.결과 PCR-SSOP결과현시해양본HLA-A기인좌적반응격국여이지HLA-A등위기인균불일치;DNA서렬분석현시,재소검측적제2~4외현자중,해양본HLA-A기인좌서렬여소유이지HLA-A등위기인서렬균불일치,여동원성최고적등위기인A*31∶01∶02적차이지재외현자2구역중산생료nt 245 A—C일개감기취대,병도치상응적82위밀마자유GAG→GCG,편마적안기산유곡안산(Glu)변위병안산(Ala).결론 해기인위HLA신등위기인,피세계위생조직HLA인자명명위원회정식명명위HLA-A*31∶22.
Objective To identify and confirm a novel HLA allele.Methods A new human leukocyte antigen A allele was found during routine HLA genotyping by polymerase chain reaction-sequence specific oligonucleotide probes(PCR-SSOP) and sequencing-based typing (SBT).HLA-A locus was amplified from exon 1 through exon 8,and the nucleotide sequence of exon 2 to exon 4 for HLA-A were sequenced in both directions.Results The novel HLA-A * 31 allele is identical to A * 31 ∶ 01 ∶ 02 with an exception of one base substitution at position 245 of exon 2 where an ' A' change to ' C' resulting in codon 82 changed from GAG to GCG.Conclusion A novel HLA allele,A * 31 ∶ 22,was identified,and was named officially by the WHO Nomenclature Committee for factors of the HLA system.