生物技术通讯
生物技術通訊
생물기술통신
LETTERS IN BIOTECHNOLOGY
2013年
1期
1-7
,共7页
孙丹%王帅%魏钦俊%姚俊%曹新
孫丹%王帥%魏欽俊%姚俊%曹新
손단%왕수%위흠준%요준%조신
GJB3基因%间隙连接蛋白%生物信息学%系统发育%三维结构
GJB3基因%間隙連接蛋白%生物信息學%繫統髮育%三維結構
GJB3기인%간극련접단백%생물신식학%계통발육%삼유결구
GJB3 gene%connexin%bioinformatics%phylogeny%3D structure
目的:对间隙连接蛋白Cx31编码基因GJB3的编码区进行生物信息学预测和分析.方法:利用ClustalW2、MEGA5.05和VMD1.9等生物信息学软件对GJB3的保守性、系统进化、三维空间结构和错义突变角度进行分子结构预测和功能分析.结果:系统进化树的构建验证了脊椎动物各纲亲缘关系远近;保守性分析为GJB3致病性突变少于GJB2提供了可能的原因;三维结构预测和错义突变分析解释了GJB3突变的致病性机制.结论:对GJB3基因及其蛋白结构和功能的分析将为后续实验研究奠定基础.
目的:對間隙連接蛋白Cx31編碼基因GJB3的編碼區進行生物信息學預測和分析.方法:利用ClustalW2、MEGA5.05和VMD1.9等生物信息學軟件對GJB3的保守性、繫統進化、三維空間結構和錯義突變角度進行分子結構預測和功能分析.結果:繫統進化樹的構建驗證瞭脊椎動物各綱親緣關繫遠近;保守性分析為GJB3緻病性突變少于GJB2提供瞭可能的原因;三維結構預測和錯義突變分析解釋瞭GJB3突變的緻病性機製.結論:對GJB3基因及其蛋白結構和功能的分析將為後續實驗研究奠定基礎.
목적:대간극련접단백Cx31편마기인GJB3적편마구진행생물신식학예측화분석.방법:이용ClustalW2、MEGA5.05화VMD1.9등생물신식학연건대GJB3적보수성、계통진화、삼유공간결구화착의돌변각도진행분자결구예측화공능분석.결과:계통진화수적구건험증료척추동물각강친연관계원근;보수성분석위GJB3치병성돌변소우GJB2제공료가능적원인;삼유결구예측화착의돌변분석해석료GJB3돌변적치병성궤제.결론:대GJB3기인급기단백결구화공능적분석장위후속실험연구전정기출.
Objective: To predict and analyze the coding region of GJB3 with bioinformatics methods. Methods:ClustalW2, MEGA5.05 and VMD1.9 were used to study phylogeny, conservation, 3D structure and missense muta?tions of GJB3 and its encoding protein Cx31. Results: Construction of the phylogenic tree verified the genetic rela?tionships among four classes of vertebrates. Conservation analysis showed that GJB2 encoding protein has a higher level of conservation than that of GJB3 encoding protein, which could become one of the reasons why pathogenic mutations of GJB3 is less than GJB2. Meanwhile, 3D structure prediction and missense mutations analysis explain the pathogenic mutations of GJB3 gene. Conclusion: Study of structure and function of GJB3 and Cx31 could pave a way for further experimental research.