中华实验和临床病毒学杂志
中華實驗和臨床病毒學雜誌
중화실험화림상병독학잡지
CHINESE JOURNAL OF EXPERIMENTAL AND CLINICAL VIROLOGY
2014年
6期
404-406
,共3页
秦萌%董晓根%张东彦%杨军勇%肖贵勇%汤旭%陆翌禹%张虹%李洁
秦萌%董曉根%張東彥%楊軍勇%肖貴勇%湯旭%陸翌禹%張虹%李潔
진맹%동효근%장동언%양군용%초귀용%탕욱%륙익우%장홍%리길
轮状病毒属%序列分析
輪狀病毒屬%序列分析
륜상병독속%서렬분석
Rotavirus%Sequence analysis
目的 了解2013年11月北京市丰台区腹泻中轮状病毒和诺如病毒发病率升高的流行情况及其基因特征 方法 2013年11月在哨点医院门诊随机采集47份腹泻患者便标本、30份环境标本,使用real-time RT-PCR进行轮状病毒(rotavirus)和诺如病毒(norovirus)的筛查;并对轮状病毒阳性标本使用RT-PCR方法扩增VP4和VP7基因,扩增产物进行序列测定.使用Blast、BioEdit及Mega4.0等软件进行序列比对及基因进化分析.结果 47份粪便标本中,37份为轮状病毒检出率为78.7%(37/470,诺如病毒阳性率为14.9%(7/47),轮状病毒和诺如病毒混合感染率为10.6% (5/47);30份环境标本中,轮状病毒检出率为23.3% (7/30),未检出诺如病毒.核酸序列比对及进化分析表明此次流行的轮状病毒为G9P[8]a型,与2010-2012年北京地区感染儿童的G9株高度同源.结论 2013年11月北京市丰台区其他感染性腹泻标本中以轮状病毒检出为主,其基因型别为G9P[8]a型,检出率远高于北京市往年水平,提示应加强对轮状病毒进行监测.
目的 瞭解2013年11月北京市豐檯區腹瀉中輪狀病毒和諾如病毒髮病率升高的流行情況及其基因特徵 方法 2013年11月在哨點醫院門診隨機採集47份腹瀉患者便標本、30份環境標本,使用real-time RT-PCR進行輪狀病毒(rotavirus)和諾如病毒(norovirus)的篩查;併對輪狀病毒暘性標本使用RT-PCR方法擴增VP4和VP7基因,擴增產物進行序列測定.使用Blast、BioEdit及Mega4.0等軟件進行序列比對及基因進化分析.結果 47份糞便標本中,37份為輪狀病毒檢齣率為78.7%(37/470,諾如病毒暘性率為14.9%(7/47),輪狀病毒和諾如病毒混閤感染率為10.6% (5/47);30份環境標本中,輪狀病毒檢齣率為23.3% (7/30),未檢齣諾如病毒.覈痠序列比對及進化分析錶明此次流行的輪狀病毒為G9P[8]a型,與2010-2012年北京地區感染兒童的G9株高度同源.結論 2013年11月北京市豐檯區其他感染性腹瀉標本中以輪狀病毒檢齣為主,其基因型彆為G9P[8]a型,檢齣率遠高于北京市往年水平,提示應加彊對輪狀病毒進行鑑測.
목적 료해2013년11월북경시봉태구복사중륜상병독화낙여병독발병솔승고적류행정황급기기인특정 방법 2013년11월재초점의원문진수궤채집47빈복사환자편표본、30빈배경표본,사용real-time RT-PCR진행륜상병독(rotavirus)화낙여병독(norovirus)적사사;병대륜상병독양성표본사용RT-PCR방법확증VP4화VP7기인,확증산물진행서렬측정.사용Blast、BioEdit급Mega4.0등연건진행서렬비대급기인진화분석.결과 47빈분편표본중,37빈위륜상병독검출솔위78.7%(37/470,낙여병독양성솔위14.9%(7/47),륜상병독화낙여병독혼합감염솔위10.6% (5/47);30빈배경표본중,륜상병독검출솔위23.3% (7/30),미검출낙여병독.핵산서렬비대급진화분석표명차차류행적륜상병독위G9P[8]a형,여2010-2012년북경지구감염인동적G9주고도동원.결론 2013년11월북경시봉태구기타감염성복사표본중이륜상병독검출위주,기기인형별위G9P[8]a형,검출솔원고우북경시왕년수평,제시응가강대륜상병독진행감측.
Objective Analysis the prevalence of rotavirus and norovirus in non-bacterial infectious diarrhea occurred in Fentai district of Beijing during November 2013 and character the rotavirus detected in these samples.Methods Forty-seven stool specimens were collected randomly from outpatients and 30 environment samples from consulting room of hopitals.Rotavirus and norovirus were screened by real-time RT-PCR.For those rotavirus positive samples,the VP4 and VP7 gene were amplified by RT-PCR.Sequence analysis of Vp7 and Vp4 gene was performed by using the software Mega 4.0.Results Thirty-seven cases had rotavirus infection with the same G9P [8] a serotypes.Only 2 cases were identified to have norovirus infection except 5 were rotavirus and norovirus coinfection.Rotavirus was found from 7 environment samples.Phylogenetic analysis demonstrated that VP7 genes in this study were highly homologous with that circulated in Beijing during 2010-2012.Conclusions The results indicated that rotavirus G9P [8] a was a major pathogen of this high incidence acute diarrhea.It is necessary to strengthen the surveillance of G9P[8] a in China.