广东工业大学学报
廣東工業大學學報
엄동공업대학학보
JOURNAL OF GUANGDONG UNIVERSITY OF TECHNOLOGY
2015年
1期
16-19,28
,共5页
人类细胞色素P4502E1%生物信息学%序列分析
人類細胞色素P4502E1%生物信息學%序列分析
인류세포색소P4502E1%생물신식학%서렬분석
human cytochrome P4502E1%bioinformatics%sequence analysis
采用生物信息学方法对人CYP2E1基因编码蛋白质的结构、理化性质、亲疏水性、信号肽、跨膜结构域、亚细胞定位、二级结构、三级结构、酶活性中心等进行预测,并对人和其他6物种的CYP2E1编码蛋白序列进行系统进化分析.研究结果表明,人CYP2E1编码493个氨基酸组成多肽,其相对分子质量约为172386.6,等电点理论值为7.04,分子式为C6778 H10986 N2074 O2429 S374.该蛋白定位于细胞膜外,属跨膜蛋白,为疏水性不稳定蛋白;该蛋白二级结构有6个β折叠、6个α-螺旋、6个跨膜结构区和32个转角,该酶活性中心由Asn202残基、Ser298残基及Phe205残基与铁卟啉环构成,CYP2E1蛋白血红素铁和底物催化位点之间的距离在0.3~0.6 nm之间.
採用生物信息學方法對人CYP2E1基因編碼蛋白質的結構、理化性質、親疏水性、信號肽、跨膜結構域、亞細胞定位、二級結構、三級結構、酶活性中心等進行預測,併對人和其他6物種的CYP2E1編碼蛋白序列進行繫統進化分析.研究結果錶明,人CYP2E1編碼493箇氨基痠組成多肽,其相對分子質量約為172386.6,等電點理論值為7.04,分子式為C6778 H10986 N2074 O2429 S374.該蛋白定位于細胞膜外,屬跨膜蛋白,為疏水性不穩定蛋白;該蛋白二級結構有6箇β摺疊、6箇α-螺鏇、6箇跨膜結構區和32箇轉角,該酶活性中心由Asn202殘基、Ser298殘基及Phe205殘基與鐵卟啉環構成,CYP2E1蛋白血紅素鐵和底物催化位點之間的距離在0.3~0.6 nm之間.
채용생물신식학방법대인CYP2E1기인편마단백질적결구、이화성질、친소수성、신호태、과막결구역、아세포정위、이급결구、삼급결구、매활성중심등진행예측,병대인화기타6물충적CYP2E1편마단백서렬진행계통진화분석.연구결과표명,인CYP2E1편마493개안기산조성다태,기상대분자질량약위172386.6,등전점이론치위7.04,분자식위C6778 H10986 N2074 O2429 S374.해단백정위우세포막외,속과막단백,위소수성불은정단백;해단백이급결구유6개β절첩、6개α-라선、6개과막결구구화32개전각,해매활성중심유Asn202잔기、Ser298잔기급Phe205잔기여철계람배구성,CYP2E1단백혈홍소철화저물최화위점지간적거리재0.3~0.6 nm지간.
The nucleotide and amino acid sequences of CYP2E1 protein ( GenBank accession number:NC000010.11 and NM000773.3) from human being have been analyzed and predicted by bioinformatics in the following aspects:physicochemical properties, hydrophilicity and hydrophobicity, the signal pep-tide, transmembrane topological structure, subcellular localization, protein secondary structure and tertia-ry structure, the enzyme active center structure, and the composition of homologous protein and phyloge-netic relationship of human being and other 6 species.The results show that the CYP2 E1 gene encodes a 493 amino acid polypeptides with the estimated relative molecular weight 172 386.6, the theoretical PI of 7.04 and the structural formula of C6778 H10986 N2074 O2429 S374;.It is also found that CYP2E1 is a transmem-brane protein with hydrophobicity and relatively unstable.There are 6 βfold, 6 α-helix, 6 transmem-brane regions and 32 angles in its secondary structure, and It's active center was composed of Asn202 resi-dues, Ser298 residues, Phe205 residues and iron porphyrin ring.The distance of its heme and substrate cat-alytic sites is 0.3-0.6 nm .