中国科学技术大学学报
中國科學技術大學學報
중국과학기술대학학보
JOURNAL OF UNIVERSITY OF SCIENCE AND TECHNOLOGY OF CHINA
2015年
3期
205-209,219
,共6页
全基因组关联分析%稀有变量%泊松近似
全基因組關聯分析%稀有變量%泊鬆近似
전기인조관련분석%희유변량%박송근사
genome-wide association study%rare variants%Poisson approximation
稀有基因变量与疾病性状的关联性研究是全基因组关联分析的补充。然而,传统的关联分析检验方法不适用于稀有变量的检验问题,因此众多的针对稀有变量的新检验方法得以被提出和运用。变阈值方法是其中的一种方法,该方法相对于传统的关联分析检验方法在功效上有较大提高。这里从稀有事件的角度看待稀有变量突变等位基因的发生,以泊松近似分布代替二项分布,提出新的检验统计量,并在变阈值方法的基础上给出一个新的检验方法,即泊松近似变阈值方法。模拟试验结果表明该方法比变阈值方法有一致更高的检验功效,筛选变量的效率也得到了提高。
稀有基因變量與疾病性狀的關聯性研究是全基因組關聯分析的補充。然而,傳統的關聯分析檢驗方法不適用于稀有變量的檢驗問題,因此衆多的針對稀有變量的新檢驗方法得以被提齣和運用。變閾值方法是其中的一種方法,該方法相對于傳統的關聯分析檢驗方法在功效上有較大提高。這裏從稀有事件的角度看待稀有變量突變等位基因的髮生,以泊鬆近似分佈代替二項分佈,提齣新的檢驗統計量,併在變閾值方法的基礎上給齣一箇新的檢驗方法,即泊鬆近似變閾值方法。模擬試驗結果錶明該方法比變閾值方法有一緻更高的檢驗功效,篩選變量的效率也得到瞭提高。
희유기인변량여질병성상적관련성연구시전기인조관련분석적보충。연이,전통적관련분석검험방법불괄용우희유변량적검험문제,인차음다적침대희유변량적신검험방법득이피제출화운용。변역치방법시기중적일충방법,해방법상대우전통적관련분석검험방법재공효상유교대제고。저리종희유사건적각도간대희유변량돌변등위기인적발생,이박송근사분포대체이항분포,제출신적검험통계량,병재변역치방법적기출상급출일개신적검험방법,즉박송근사변역치방법。모의시험결과표명해방법비변역치방법유일치경고적검험공효,사선변량적효솔야득도료제고。
The association study of rare genetic variants and disease traits as a supplement of genome‐wide association study (GWAS ) has achieved remarkable development and application . But the traditional association testing methods are not suitable for the rare variants association problem .Many new testing methods designed specifically for the rare variants have been proposed and applied .T he variable‐threshold (VT ) method is one of them , which has achieved more power than the traditional association test methods .Here the occurrence of the mutation of rare variants was treated as a rare event . Poisson distribution was taken instead of binomial distribution and a new test statistic was proposed .Base on the V T method , a new test method w as proposed , namely , the Poisson approximation variable threshold method (PAVT ) . Simulation results show that the new method has more power than VT method uniformly ,and variant selection is more efficient .