中国中医药信息杂志
中國中醫藥信息雜誌
중국중의약신식잡지
CHINESE JOURNAL OF INFORMATION ON TRADITIONAL CHINESE MEDICINE
2015年
9期
83-86
,共4页
邓思珊%刘洪旭%孟春%梁一池%徐榕青%林文津%张亚敏
鄧思珊%劉洪旭%孟春%樑一池%徐榕青%林文津%張亞敏
산사산%류홍욱%맹춘%량일지%서용청%림문진%장아민
草珊瑚%ISSR法%遗传多样性%聚类分析
草珊瑚%ISSR法%遺傳多樣性%聚類分析
초산호%ISSR법%유전다양성%취류분석
Sarcandra Glabra%ISSR%genetic diversity%cluster analysis
目的:研究福建草珊瑚基地不同地理种源的草珊瑚遗传多样性,构建亲缘关系图。方法采用CTAB法提取叶子中DNA,ISSR法对45个种源的草珊瑚样品进行DNA分子水平的分析评价,POPgen32软件计算遗传多样性,建立基因树谱,采用NTSYS软件进行聚类分析。结果6条ISSR引物共扩增出630条条带,遗传多样性分析表明45个品种平均有效等位基因数为1.6202,平均Nei's基因多样性指数为0.3645,平均Shannon信息指数为0.5432。各位点遗传多样性程度也存在较大差别,Nei's基因多样性指数最大值为0.4972,最小值为0.1078;Shannon信息指数最大值为0.6903,最小值为0.2192。聚类分析结果显示,以45个品种和14个位点的谱带数据为原始矩阵,共获得630个两两不同品种间的遗传相似系数,不同组之间相似系数最大者为1.0,最小者为0.516。结论福建三明种植的草珊瑚品种间存在丰富的遗传变异,具有丰富品种的分子基础。以0.610为阈值可以把45个不同地理种源的草珊瑚分为6个组。遗传距离与种源地理远近无明显相关。
目的:研究福建草珊瑚基地不同地理種源的草珊瑚遺傳多樣性,構建親緣關繫圖。方法採用CTAB法提取葉子中DNA,ISSR法對45箇種源的草珊瑚樣品進行DNA分子水平的分析評價,POPgen32軟件計算遺傳多樣性,建立基因樹譜,採用NTSYS軟件進行聚類分析。結果6條ISSR引物共擴增齣630條條帶,遺傳多樣性分析錶明45箇品種平均有效等位基因數為1.6202,平均Nei's基因多樣性指數為0.3645,平均Shannon信息指數為0.5432。各位點遺傳多樣性程度也存在較大差彆,Nei's基因多樣性指數最大值為0.4972,最小值為0.1078;Shannon信息指數最大值為0.6903,最小值為0.2192。聚類分析結果顯示,以45箇品種和14箇位點的譜帶數據為原始矩陣,共穫得630箇兩兩不同品種間的遺傳相似繫數,不同組之間相似繫數最大者為1.0,最小者為0.516。結論福建三明種植的草珊瑚品種間存在豐富的遺傳變異,具有豐富品種的分子基礎。以0.610為閾值可以把45箇不同地理種源的草珊瑚分為6箇組。遺傳距離與種源地理遠近無明顯相關。
목적:연구복건초산호기지불동지리충원적초산호유전다양성,구건친연관계도。방법채용CTAB법제취협자중DNA,ISSR법대45개충원적초산호양품진행DNA분자수평적분석평개,POPgen32연건계산유전다양성,건립기인수보,채용NTSYS연건진행취류분석。결과6조ISSR인물공확증출630조조대,유전다양성분석표명45개품충평균유효등위기인수위1.6202,평균Nei's기인다양성지수위0.3645,평균Shannon신식지수위0.5432。각위점유전다양성정도야존재교대차별,Nei's기인다양성지수최대치위0.4972,최소치위0.1078;Shannon신식지수최대치위0.6903,최소치위0.2192。취류분석결과현시,이45개품충화14개위점적보대수거위원시구진,공획득630개량량불동품충간적유전상사계수,불동조지간상사계수최대자위1.0,최소자위0.516。결론복건삼명충식적초산호품충간존재봉부적유전변이,구유봉부품충적분자기출。이0.610위역치가이파45개불동지리충원적초산호분위6개조。유전거리여충원지리원근무명현상관。
Objective To study the genetic diversity in Fujian Sanming Sarcandra Glabra from different geographical provenances;To construct genetic relationship diagram.Methods DNA in leaves was extracted by CTAB. Analysis and evaluation of DNA molecular level of 45 samples of different geographical provenances were conducted by ISSR method. POPgen32 software was used to calculate the genetic diversity and establish gene trees. NTSYS software was used to carry out cluster analysis.Results Six ISSR primers amplified 630 bands. Genetic diversity analysis showed that the average effective number of alleles of 45 varieties was 1.620 2;the average Nei's genetic diversity index was 0.364 5;the average Shannon information index was 0.543 2. Each point had different levels of genetic diversity. Nei's genetic diversity index of the maximum value was 0.497 2, and the minimum value was 0.107 8;Maximum Shannon information index was 0.690 3, and the minimum value was 0.219 2. Cluster analysis results showed that 45 varieties and 14 loci band data were the primitive matrix. 630 genetic similarity coefficients between two different species were obtained. The maximum similarity coefficient among different groups was 1.0, and the minimum was 0.516.Conclusion Different varieties of Fujian Sanming Sarcandra Glabra exist abundant genetic variation and has the molecular basis of abundant species. Using 0.610 as the threshold value can divide Sarcandra Glabra from 45 different geographical provenances into 6 groups. The genetic distance and geographical distance was not related.