南京林业大学学报(自然科学版)
南京林業大學學報(自然科學版)
남경임업대학학보(자연과학판)
Journal of Nanjing Forestry University(Natural Science Edition)
2015年
5期
7-13
,共7页
麻文建%张静%郑磊%朱天辉
痳文建%張靜%鄭磊%硃天輝
마문건%장정%정뢰%주천휘
板栗疫病菌%分子检测%双重PCR%ITS%SCAR标记
闆慄疫病菌%分子檢測%雙重PCR%ITS%SCAR標記
판률역병균%분자검측%쌍중PCR%ITS%SCAR표기
C. parasitica%molecular detection%duplex PCR%ITS%SCAR marker
由板栗疫病菌( Cyphonectria parasitica)引起的板栗疫病是板栗栽培区的主要病害,也是全国林业危险性有害生物. 为建立C. parasitica的快速分子检测技术,根据C. parasitica与GenBank中同属其他物种的ITS序列差异设计了引物 CP1/CP2,扩增了大小为 285 bp 的目的片段. 进一步用 RAPD 技术从供试菌株中标记出C. parasitica的特异性片段,通过对RAPD特异片段克隆、测序后设计引物SC1/SC2,扩增的目的片段大小为389 bp,实现了RAPD标记向SCAR标记的成功转化. 采用引物对组合方式将引物CP1/CP2和SC1/SC2组成双重PCR,优化PCR反应条件并检测引物的特异性和灵敏度. 双重PCR能从C. parasitica扩增出285 bp和389 bp的两条特异条带,而其他供试菌株及阴性对照均无条带,检测灵敏度达到300 fg/μL的基因组DNA. 利用双重PCR能成功检测出自然条件下已发病板栗及处于潜伏期病害中的C. parasitica.
由闆慄疫病菌( Cyphonectria parasitica)引起的闆慄疫病是闆慄栽培區的主要病害,也是全國林業危險性有害生物. 為建立C. parasitica的快速分子檢測技術,根據C. parasitica與GenBank中同屬其他物種的ITS序列差異設計瞭引物 CP1/CP2,擴增瞭大小為 285 bp 的目的片段. 進一步用 RAPD 技術從供試菌株中標記齣C. parasitica的特異性片段,通過對RAPD特異片段剋隆、測序後設計引物SC1/SC2,擴增的目的片段大小為389 bp,實現瞭RAPD標記嚮SCAR標記的成功轉化. 採用引物對組閤方式將引物CP1/CP2和SC1/SC2組成雙重PCR,優化PCR反應條件併檢測引物的特異性和靈敏度. 雙重PCR能從C. parasitica擴增齣285 bp和389 bp的兩條特異條帶,而其他供試菌株及陰性對照均無條帶,檢測靈敏度達到300 fg/μL的基因組DNA. 利用雙重PCR能成功檢測齣自然條件下已髮病闆慄及處于潛伏期病害中的C. parasitica.
유판률역병균( Cyphonectria parasitica)인기적판률역병시판률재배구적주요병해,야시전국임업위험성유해생물. 위건립C. parasitica적쾌속분자검측기술,근거C. parasitica여GenBank중동속기타물충적ITS서렬차이설계료인물 CP1/CP2,확증료대소위 285 bp 적목적편단. 진일보용 RAPD 기술종공시균주중표기출C. parasitica적특이성편단,통과대RAPD특이편단극륭、측서후설계인물SC1/SC2,확증적목적편단대소위389 bp,실현료RAPD표기향SCAR표기적성공전화. 채용인물대조합방식장인물CP1/CP2화SC1/SC2조성쌍중PCR,우화PCR반응조건병검측인물적특이성화령민도. 쌍중PCR능종C. parasitica확증출285 bp화389 bp적량조특이조대,이기타공시균주급음성대조균무조대,검측령민도체도300 fg/μL적기인조DNA. 이용쌍중PCR능성공검측출자연조건하이발병판률급처우잠복기병해중적C. parasitica.
Chestnut blight caused by Cyphonectria parasitica is the main disease in Castanea mollissima cultivation area. According to the nucleotide sequence of internal transcribed spacer regions ( ITS) of the ribosomal gene of Cryphonectria in GenBank, a couple of primers CP1/CP2 for C. parasitica were developed. By random amplification polymorphism technology, we identified a specific RAPD fragment of C. parasitica from all the strains tested. After recycling and purifi?cation, the specific fragment was cloned and sequenced. The sequence was used to design two specific primers SC1/SC2 and converted RAPD marker to SCAR marker successfully. Combining the primers CP1/CP2 and SC1/SC2, a duplex PCR method for detecting C. parasitica had been established. The result indicated that the duplex PCR could amplify two unique fragments of 285 bp and 389 bp in size from C. parasitica,but other strains tested didn?t present any fragments. Sensitivity testing showed that the detection limit was 300 fg/μL for genomic DNA. The duplex PCR method also suc?cessfully detected C. parasitica from infected chestnut tissues. Our results suggested that the duplex PCR method would have great significance for accurate identification and detection of C. parasitica.