农业环境科学学报
農業環境科學學報
농업배경과학학보
Journal of Agro-Environment Science
2015年
9期
1659-1664
,共6页
晋海军%胡洪利%陈惠%张世熔%吴琦%孙蓉%唐自钟
晉海軍%鬍洪利%陳惠%張世鎔%吳琦%孫蓉%唐自鐘
진해군%호홍리%진혜%장세용%오기%손용%당자종
籽粒苋%镉胁迫%DDRT-PCR技术
籽粒莧%鎘脅迫%DDRT-PCR技術
자립현%력협박%DDRT-PCR기술
Amaranthus hypochondriacus%cadmium stress%DDRT-PCR
以镉污染修复植物籽粒苋(Amaranthus hypochondriacus)的根、叶、果为实验材料,利用DDRT-PCR技术分析籽粒苋Cd胁迫下基因表达水平的变化。结果表明:回收差异片段获得镉处理诱导的4个差异表达序列(EST-1、EST-2、EST-3和EST-4),经Blastn比对,EST-1与土人参26S核糖体RNA基因部分序列(GB|HQ843466.1)一致性为99%,EST-2与虎耳草26S核糖体RNA大亚基基因部分序列(GB|AF036498.1)一致性为93%,EST-3与大肠杆菌菌株TW 14359 DNA聚合酶Ⅲα亚基基因(ECs0186)完整CDS(GB|EU906049.1)一致性为97%,EST-4与米曲霉RIB40β-葡萄糖苷酶基因(XM 001816779.2)一致性为99%;经Blastx比对, EST-1与假定蛋白MTR 5g051030[苜蓿](XP 003614386.1)氨基酸序列相似性为26%,EST-2与假定衰老相关蛋白[柏杉](GB|ACA30301.1)氨基酸序列一致性为98%,EST-3与DNA聚合酶Ⅲα亚基[大肠杆菌OP50](ZP 06935700.1)氨基酸序列一致性为100%,EST-4与β-葡萄糖苷酶[黄曲霉NRRL3357](XP 002383240.1)氨基酸序列一致性为99%;4个差异表达基因通过调控蛋白质代谢、DNA复制和糖代谢等途径来应答镉胁迫。
以鎘汙染脩複植物籽粒莧(Amaranthus hypochondriacus)的根、葉、果為實驗材料,利用DDRT-PCR技術分析籽粒莧Cd脅迫下基因錶達水平的變化。結果錶明:迴收差異片段穫得鎘處理誘導的4箇差異錶達序列(EST-1、EST-2、EST-3和EST-4),經Blastn比對,EST-1與土人參26S覈糖體RNA基因部分序列(GB|HQ843466.1)一緻性為99%,EST-2與虎耳草26S覈糖體RNA大亞基基因部分序列(GB|AF036498.1)一緻性為93%,EST-3與大腸桿菌菌株TW 14359 DNA聚閤酶Ⅲα亞基基因(ECs0186)完整CDS(GB|EU906049.1)一緻性為97%,EST-4與米麯黴RIB40β-葡萄糖苷酶基因(XM 001816779.2)一緻性為99%;經Blastx比對, EST-1與假定蛋白MTR 5g051030[苜蓿](XP 003614386.1)氨基痠序列相似性為26%,EST-2與假定衰老相關蛋白[柏杉](GB|ACA30301.1)氨基痠序列一緻性為98%,EST-3與DNA聚閤酶Ⅲα亞基[大腸桿菌OP50](ZP 06935700.1)氨基痠序列一緻性為100%,EST-4與β-葡萄糖苷酶[黃麯黴NRRL3357](XP 002383240.1)氨基痠序列一緻性為99%;4箇差異錶達基因通過調控蛋白質代謝、DNA複製和糖代謝等途徑來應答鎘脅迫。
이력오염수복식물자립현(Amaranthus hypochondriacus)적근、협、과위실험재료,이용DDRT-PCR기술분석자립현Cd협박하기인표체수평적변화。결과표명:회수차이편단획득력처리유도적4개차이표체서렬(EST-1、EST-2、EST-3화EST-4),경Blastn비대,EST-1여토인삼26S핵당체RNA기인부분서렬(GB|HQ843466.1)일치성위99%,EST-2여호이초26S핵당체RNA대아기기인부분서렬(GB|AF036498.1)일치성위93%,EST-3여대장간균균주TW 14359 DNA취합매Ⅲα아기기인(ECs0186)완정CDS(GB|EU906049.1)일치성위97%,EST-4여미곡매RIB40β-포도당감매기인(XM 001816779.2)일치성위99%;경Blastx비대, EST-1여가정단백MTR 5g051030[목숙](XP 003614386.1)안기산서렬상사성위26%,EST-2여가정쇠로상관단백[백삼](GB|ACA30301.1)안기산서렬일치성위98%,EST-3여DNA취합매Ⅲα아기[대장간균OP50](ZP 06935700.1)안기산서렬일치성위100%,EST-4여β-포도당감매[황곡매NRRL3357](XP 002383240.1)안기산서렬일치성위99%;4개차이표체기인통과조공단백질대사、DNA복제화당대사등도경래응답력협박。
Amaranthus hypochondriacus has great potential for phytoremediation of cadmium(Cd)polluted soils. In this study, differential display reverse transcriptase polymerase chain reaction(DDRT- PCR) was used to screen differentially expressed genes in the roots , leaves and fruits of A . hypochondriacus under Cd stress. The novel bands were recovered and four differentially expressed cDNA fragments [EST (Expressed sequence tags)-1, EST-2, EST-3 and EST-4] were obtained. All ESTs had homology with known cDNA clones in the Genbank databases. The EST-1 was similar to partial sequences of Talinum paniculatum 26S ribosomal RNA gene(GB|HQ843466.1)with an identity of 99%, while the EST-2 showed similarity to partial sequences of Saxifraga mertensiana large subunit 26S ribosomal RNA gene (GB|AF036498.1)with an identity of 93%. The EST-3 was similar to complete cds of Escherichia coli strain TW 14359 DNA poly-merase Ⅲ alpha subunit(ECs0186)gene(GB|EU906049.1)and their identity was 97%. The EST- 4 was similar to Aspergillus oryzae RIB40beta-glucosidaseA(XM 001816779.2)andtheidentitywas99%.AfterBlastXcomparison,EST-1wassimilartohypothetical proteinMTR 5g051030[Medicagotruncatula](XP 003614386.1)withanidentityof26%,EST-2similartoputativesenescence-associat-ed protein[Cupressus sempervirens](GB|ACA30301.1)with an identity of 98%, EST-3 similar to DNA polymerase Ⅲ subunit alpha[Es-cherichiacoliOP50](ZP 06935700.1)withanidentityof100%,andEST-4similartobeta-glucosidase[AspergillusflavusNRRL3357] (XP 002383240.1)withanidentityof99%.Thesefourdifferentiallyexpressedgeneswereresponsivetocadmiumstressthroughregulating protein metabolism, DNA replication and glucose metabolism.