农业科学与技术(英文版)
農業科學與技術(英文版)
농업과학여기술(영문판)
Agricultural Science & Technology
2015年
10期
2214-2220,2282
,共8页
王小利%吴佳海%李小冬%舒健虹%刘晓霞%王舒颖%蔡一鸣
王小利%吳佳海%李小鼕%舒健虹%劉曉霞%王舒穎%蔡一鳴
왕소리%오가해%리소동%서건홍%류효하%왕서영%채일명
高羊茅%FaGF14-B 基因%FaGF14-C基因%克隆%差异表达分析
高羊茅%FaGF14-B 基因%FaGF14-C基因%剋隆%差異錶達分析
고양모%FaGF14-B 기인%FaGF14-C기인%극륭%차이표체분석
Tal fescue%FaGF14-B gene%FaGF14-C gene%Cloning%Differential ex-pression analysis
[目的]克隆高羊茅 FaGF14-B和FaGF14-C基因并进行基因的差异表达分析,为后续基因功能研究提供依据。[方法]以高羊茅转录组学测序获得的 FaGF14-B 和FaGF14-C基因序列片段为模板,利用3'RACE和5'RACE方法从高羊茅中扩增出 FaGF14-B和FaGF14-C基因的全长 cDNA序列,命名为FaGF14-B和 FaGF14-C,并进行核酸序列分析、基因编码蛋白分析、蛋白保守结构域分析、系统进化树分析与差异表达分析。[结果] FaGF14-B基因序列 cDNA全长1548 bp,具有完整的开放阅读框(ORF,449~1228 bp),编码蛋白为260个氨基酸;FaGF14-C基因序列 cDNA全长1250 bp,具有完整的开放阅读框(ORF,66~848 bp),编码蛋白含有261个氨基酸;GF14-B和 GF14-C蛋白都具有典型的14-3-3蛋白结构域,二级结构包含9个保守的α-螺旋及不保守的 N-末端和 C-末端。系统进化树分析表明,高羊茅 FaGF14-B 和FaGF14-C与禾本科植物 GF14蛋白具有较高的相似性,位于在同一个进化支上,亲缘关系较近;荧光定量 PCR分析表明:FaGF14-B和FaGF14-C基因应答氮胁迫处理。[结论]该研究可为进一步筛选抗低氮胁迫相关基因、创制耐低氮的牧草新种质奠定理论基础。
[目的]剋隆高羊茅 FaGF14-B和FaGF14-C基因併進行基因的差異錶達分析,為後續基因功能研究提供依據。[方法]以高羊茅轉錄組學測序穫得的 FaGF14-B 和FaGF14-C基因序列片段為模闆,利用3'RACE和5'RACE方法從高羊茅中擴增齣 FaGF14-B和FaGF14-C基因的全長 cDNA序列,命名為FaGF14-B和 FaGF14-C,併進行覈痠序列分析、基因編碼蛋白分析、蛋白保守結構域分析、繫統進化樹分析與差異錶達分析。[結果] FaGF14-B基因序列 cDNA全長1548 bp,具有完整的開放閱讀框(ORF,449~1228 bp),編碼蛋白為260箇氨基痠;FaGF14-C基因序列 cDNA全長1250 bp,具有完整的開放閱讀框(ORF,66~848 bp),編碼蛋白含有261箇氨基痠;GF14-B和 GF14-C蛋白都具有典型的14-3-3蛋白結構域,二級結構包含9箇保守的α-螺鏇及不保守的 N-末耑和 C-末耑。繫統進化樹分析錶明,高羊茅 FaGF14-B 和FaGF14-C與禾本科植物 GF14蛋白具有較高的相似性,位于在同一箇進化支上,親緣關繫較近;熒光定量 PCR分析錶明:FaGF14-B和FaGF14-C基因應答氮脅迫處理。[結論]該研究可為進一步篩選抗低氮脅迫相關基因、創製耐低氮的牧草新種質奠定理論基礎。
[목적]극륭고양모 FaGF14-B화FaGF14-C기인병진행기인적차이표체분석,위후속기인공능연구제공의거。[방법]이고양모전록조학측서획득적 FaGF14-B 화FaGF14-C기인서렬편단위모판,이용3'RACE화5'RACE방법종고양모중확증출 FaGF14-B화FaGF14-C기인적전장 cDNA서렬,명명위FaGF14-B화 FaGF14-C,병진행핵산서렬분석、기인편마단백분석、단백보수결구역분석、계통진화수분석여차이표체분석。[결과] FaGF14-B기인서렬 cDNA전장1548 bp,구유완정적개방열독광(ORF,449~1228 bp),편마단백위260개안기산;FaGF14-C기인서렬 cDNA전장1250 bp,구유완정적개방열독광(ORF,66~848 bp),편마단백함유261개안기산;GF14-B화 GF14-C단백도구유전형적14-3-3단백결구역,이급결구포함9개보수적α-라선급불보수적 N-말단화 C-말단。계통진화수분석표명,고양모 FaGF14-B 화FaGF14-C여화본과식물 GF14단백구유교고적상사성,위우재동일개진화지상,친연관계교근;형광정량 PCR분석표명:FaGF14-B화FaGF14-C기인응답담협박처리。[결론]해연구가위진일보사선항저담협박상관기인、창제내저담적목초신충질전정이론기출。
Objective] The differential expression analysis was performed for FaGF14-B and FaGF14-C genes in tal fescue so as to provide certain basis for fol ow-up functional analysis of genes. [Method] The sequence fragments of FaGF14-B and FaGF14-C obtained from reverse transcription were used as templates, and the ful-length cDNA sequences of FaGF14-B and FaGF14-C were amplified using the 5’ RACE use 3’RACE techniques. They were named as FaGF14-B and FaGF14-C, and used for nucleic acid sequence analysis, encoded protein analysis, protein con-served domain analysis, phylogenetic analysis and differential expression analysis. [Result] The FaGF14-B gene has a ful length of 1 548 bp. It has a complete open reading frame (ORF, 449-1 228 bp), and encodes a protein composed of 261 amino acids. The FaGF14-C gene has a ful length of 1 250 bp. It also has a complete open reading frame (ORF, 66-848 bp), and encodes a protein composed of 261 amino acids. The GF14-B and GF14-C proteins al have a typical domain 14-3-3, and their secondary structures al contain 9 conserved α-helical structures and non-conserved N- and C- terminals. The phylogenetic analysis showed that the FaGF14-B and FaGF14-C from tal fescue have high similarities with GF14 protein from gramineous plants, and they are divided into the same clade with closer ge-netic relationship. The real-time fluorescence quantitative PCR analysis showed that the expression of FaGF14-B and FaGF14-C genes is al sensitive to nitrogen stress. [Conclusion] This study wil lay a theoretical basis for further screening of low nitrogen-tolerant genes and breeding of low nitrogen-tolerant grass germplasms.